KEGG   Populus alba (white poplar): 118031370
Entry
118031370         CDS       T07314                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
palz  Populus alba (white poplar)
Pathway
palz03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    118031370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:palz04121]
    118031370
   03036 Chromosome and associated proteins [BR:palz03036]
    118031370
Enzymes [BR:palz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118031370
Ubiquitin system [BR:palz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    118031370
Chromosome and associated proteins [BR:palz03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     118031370
    Noncanonical PRC1 (PRC1.1)
     118031370
    Noncanonical PRC1 (PRC1.3/1.5)
     118031370
    Noncanonical PRC1 (PRC1.6)
     118031370
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-UDP zf-rbx1 zf-RING_6 zf-Nse zf-C3HC4_5 ZNF512_C2HC zf-RING_11
Other DBs
NCBI-GeneID: 118031370
NCBI-ProteinID: XP_034891642
LinkDB
Position
11:18716024..18721361
AA seq 450 aa
MPAQKRSYETLQKEDDTLLRQQQDHTNNNHEQKQEPRSDIDDDGGVGEQSDRSQPSSSIN
EDVKEEYVVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPAC
RTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFQEDEKARNKEIQATIAQTFDRQA
EALSRKRSTAKATAAVFARRTPSRFRHAHSRGRRNYQIAELQGSDDNEDANGGGGKDSSS
TDEHSAEVKPKRYRRCSAAFNADGSGGENDSEVNKESVGASAGLISSSERLAWGKNGMRS
HTRYGSANGSNVKNARNSRISKLADYLRNLDENDNELDINLMLVSFDEQRVPSLQRPYLC
CRPTLSIKSLCQYVAFQTSLQANEVEIYLVQDMNSKRDFSVSMSSPVSRHGIIDPCKDKL
QVLEEHETLGGLKTNNCIHGHLLLAYQKKL
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgccagcccagaaacgttcctacgagaccctccagaaggaagatgatactcttcttcgg
cagcagcaagaccacactaacaacaaccatgaacaaaagcaagagcctcgaagcgatatt
gatgatgacggtggtgttggtgagcaatccgatcgaagccagccttcttcaagtattaac
gaagacgtgaaagaagaatatgttgtagtgaagttgtcggagatacggaaggaagtgcaa
tgcccaatctgtctagggattattcgtaaaacaagaacagtgatggaatgtctgcatcgt
ttttgcagggaatgcattgacaaatctatgcggctcggaaacaacgagtgcccagcttgc
cgcacgcattgtgccagtcgtaggtctttgagagatgacccaaattatgatgcactaata
gcagctttgtatccagatattgacaaatatgaagaagaggaattggctttccaagaagat
gagaaggcacgtaataaggagatccaggctaccattgcccagacttttgatcgacaggct
gaagctctgagtagaaaacggtcaacagctaaagcgacggcagcagtatttgcaaggaga
acaccaagtcgatttcgacatgcccactcaaggggaagaagaaattatcaaatagctgaa
cttcaaggatctgatgacaatgaagatgcaaatggtggtggaggcaaagattcatcatct
actgatgagcacagtgcagaagtcaaaccaaaaagataccggaggtgttcagctgctttt
aatgcagatggaagtggtggtgaaaatgattcagaagtgaataaagaatctgtgggggca
tctgctgggctcattagctcctcagaaaggcttgcctggggcaaaaatggcatgcggagt
cacacccggtatggcagtgcaaatggcagcaatgtaaaaaatgctcgaaacagtcgcatc
tctaagttagctgattatctacgtaacttggatgaaaatgataatgagttggatatcaac
ctcatgcttgtttcttttgatgaacaaagagtacccagtttgcagcgcccatacctttgc
tgcaggccaactttgtcgattaagagcttgtgccaatatgttgctttccaaacctctttg
caagccaatgaagtggaaatatatttggtccaagatatgaattccaagcgcgacttttct
gtctccatgagctctccagtttccaggcacggtataatcgatccatgcaaagataaattg
caagttttagaagaacacgaaactttgggaggactcaaaacaaacaattgcattcatggg
cacctgcttctggcttatcagaaaaagctgtga

DBGET integrated database retrieval system