Populus alba (white poplar): 118031420
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Entry
118031420 CDS
T07314
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
palz
Populus alba (white poplar)
Pathway
palz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
118031420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118031420
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118031420
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
DUF7885
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
118031420
NCBI-ProteinID:
XP_034891724
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All DBs
Position
11:complement(17549914..17556273)
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AA seq
585 aa
AA seq
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MDSNPKMRKEFLDSTRSSPFPDEVLERVLSLLRSHKDRSAVSLVCKDWYNAESWSRTHVF
IGNCYSVSPEIVARRFPRIKSVTLKGKPRFSDFNLVPENWGADVHPWLVVFAAKYPFLEE
LRLKRMAVSDESLEFLALNFPNFKVLSLLSCDGFSTDGLAAIATHCKNLTQLDIQENGID
DKSGNWLSCFPENFTSLEVLNFANLNTDVNFDALERLVSRCKSLKVLKANKSISLEHLQR
LLVCAPQLTELGTGSFMPELTAHQYAELGSSFNQLKNLNTLSGLWEATAPYLPVLYPACT
NLTFLNLSYAFLQSIELASLLCQCPRLQRLWVLDTVGDKGLEAVGSNCPLLEELRVFPAD
PFDEEVIHGVTEAGFLAVSYGCRRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRLCIMNP
GQPDYLTNEPMDEAFGAVVRTCTKLQRLSVSGLLTDLTFEYIGQYAKNLETLSVAFAGSS
DRGMQCMLEGCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSACNVTMNGCRVLARE
MPRLNVEVMKEDGSDDSQADKVYVYRSVVGPRRDAPPCVLTLSGL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaatccaaagatgagaaaggaatttcttgactcaacaagatcatctccattt
ccagatgaagtactggaacgagttctttcactcttgagatcacacaaagatcgtagcgca
gtctctttagtatgcaaggattggtacaacgcagagagctggtcaagaactcatgttttt
ataggaaactgttattcagtctctcctgaaattgttgcacgtagattcccaagaattaag
agcgtgactctcaaagggaagccgagattttctgattttaatctggtccctgaaaactgg
ggagctgatgttcatccttggcttgtagttttcgctgcaaagtatccctttttggaagag
ttaaggcttaagagaatggctgttagcgatgaaagtttggagtttttggctcttaatttt
cctaatttcaaggttctttctcttttgagctgtgatgggtttagtactgatgggcttgct
gctattgccactcattgcaagaatttgactcagcttgatatacaagagaatggcattgat
gacaagagtggcaactggttaagctgcttccctgaaaacttcacatcattggaagtacta
aactttgccaacttgaacactgatgtcaattttgatgcacttgagaggcttgtaagtcgg
tgcaaatcactgaaggttctgaaggccaacaaaagtatttccttggaacacctacaaagg
ctgctggtttgtgctccacagttaacagagcttggtactggttcattcatgccagagctt
acagctcaccagtacgctgagcttggaagttcatttaaccagttgaagaatttaaatacc
ctttctggtttatgggaggcaacagcaccatacttaccagttctctatcctgcctgtaca
aacttgactttcttaaacttgagctatgcctttctgcaaagtattgaacttgcgagtctt
ctttgtcaatgtccacgtcttcaacgcctctgggtcttggacactgtgggggacaaaggt
ttggaggctgttggatctaactgtccattgcttgaggagctccgtgtcttccctgccgat
ccctttgatgaggaagttatccatggggtgactgaagctgggtttcttgctgtgtcttac
ggatgtcggagactccactatgttctctacttttgcaggcagatgactaatgctgcagta
gccaccattgtgcagaactgcccagatttcacccacttccgtctctgcataatgaatcca
ggccaaccagattacttgacaaacgaacccatggatgaagcttttggggcggtagtgagg
acatgcactaaactacagaggctttctgtttcaggtctcttgactgacctgacattcgag
tatattgggcagtatgccaaaaatctggaaactctgtcagtggcttttgctggcagtagt
gatagggggatgcagtgcatgctggaaggttgtccaaagttgaggaaacttgagataagg
gactgcccatttggaaatgcagcacttctttcaggtttggagaaatacgagtcaatgagg
tctctttggatgtcagcctgcaatgtgacaatgaatggctgtcgggtattggcaagggag
atgcccagattgaatgtagaggtaatgaaagaggatgggagtgatgattctcaggctgat
aaagtttatgtttatcgttctgttgtgggaccaagaagagatgccccgccttgtgtactg
actctctcaggtttataa
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