Populus alba (white poplar): 118031559
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Entry
118031559 CDS
T07314
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
palz01002
]
118031559
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118031559
Enzymes [BR:
palz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118031559
Peptidases and inhibitors [BR:
palz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118031559
Ubiquitin system [BR:
palz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118031559
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
118031559
NCBI-ProteinID:
XP_034891901
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All DBs
Position
11:complement(20097032..20104181)
Genome browser
AA seq
1139 aa
AA seq
DB search
MHVEGDLGFSSLVILVFCVVAIPVGWFVIRCKWRGVVARKEEIKRLMVLAAEEAARAELE
ATVSYGTVPVLKNNYQCVVCFCPRTTRCARCKAVRYCSGKCQIIHWRQGHKEECRPPPTT
YHINDDGGNPGQRAAKQDQDDIYDGRYEKRPIETFSVEPVVSDSSYSPGVSLLKDDDIIV
DSVLDTEGADSISESPGTSFSGFSTPTGSSFSGFSAHSNGESSDSVSVSESISSNETEGS
DRQTPADIAPDTLESSLNEVDTTKPSSPKFSTLVDSIDSFNKLSKSNQSKPHGNDRESQC
SSSSSSHSVSARNDETITKPAKVSSGFWGRTLDSVGPSSDAGNGSALSNFNGPGNSKSSN
DKPSLLVKSSLSGRDAPMSHAKSSKVNSIISDDAPPSVPGVSRPADGAVSPEKNGFDALK
VKRSPTISFERSNLVDNNSGGGSNVSIESKSVSSSSPFAHVSFSSGGVKLDPSASKVCRS
QALRSERSNVDVDEIVNTSHLSKSRSSSSASQTHLNSSVGGHSVSSVKLGGKVENVEPGA
AATSQISSYSPNSINGLKSSVWKVVDQFRGPKCGRYSNKGLFPYDLFVKLYTSNKVEMRP
CGLINCGNSCYANAVLQCLAFTPPLTSYFVQGLHSKACVNKERCFSCEFENVILKAKEGK
SPLSPIGILSQLQNIGSQLGNGREEDAHEFLRYAIDAMQSVCLKEARVNAVDSFEEEATL
IGLTFGGYLRSKIKCMKCHYKSEWQERMMDLTVEIEGDIGKLEDALRRFTGTEILDGDNK
YHCGRCRSYEKAKKKLTILEAPNVLTIALKRFQSGKFGKLNKSIRFPEILDLAPYMSGTS
DKSPVYRLYGVIVHLDVMNAAFSGHYVCYVKNIQNKWFKVDDSTVTAVELERVLSKGAYM
LLYARCSPRAPRLIRSRIISSDPKNKCSPSKIKATNTALNSRSMSMQSNVVQLHPDSIPL
DNLASVESSYLKLHRLLRISEEDLSSDNFSFTSGNSDEGSCSTDSTHDSTSTDDLSDYIF
GSWNSWRNASDSDTSSSSSPLYSRYSPHADKNQNDSHTYSRIGGRDLSDRIPSGGRKLVD
LEGKGGNSFLHPDTTEQCRKLASSNSCRDKVSTKLGSLNPLNDVKSGVSFRRSVSERTD
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcgagggggatctagggttttcgagcctagtgatccttgttttctgtgtagtg
gctattccggtgggttggtttgtaattaggtgtaaatggcggggagtggttgcgagaaag
gaggagatcaagaggttgatggttttagcggcagaggaagccgctagggccgagcttgag
gccacggtttcgtacggcaccgttccggttttaaaaaataattaccagtgtgttgtttgt
ttttgcccgagaacgacacggtgtgcccgctgtaaagctgttagatattgttctggtaag
tgtcaaattatccactggcgacaaggtcacaaagaagaatgtcgtcctcctcccaccaca
taccacattaatgacgatggaggcaatcctggccagagggcggcaaagcaagaccaagat
gatatttatgatggcagatatgagaaaagaccaattgaaacattttctgtggaacctgtg
gtgtctgattccagttactctcctggagtttcactcttaaaggatgatgatattatagtt
gattctgttttagacacagagggagcagattctatttccgaatcaccgggcacctcattt
tctggattttccactcctacaggctcttcattttctggattctctgctcattcaaatggg
gaatcatctgacagtgtttctgtaagtgagagcattagttcaaatgaaacagagggatca
gacagacaaacaccggctgatattgcccctgatacgcttgagtccagtctgaacgaggtg
gatacgaccaaaccatcatctccaaagttttctactttggttgattctatagatagtttt
aataaattgagtaaatcaaatcagagtaaacctcatggaaatgacagggagagtcaatgc
tcatctagttcttcaagccatagcgtcagtgccaggaatgatgaaacaatcacaaaacca
gcaaaggtttcttctggtttctgggggagaactctggattctgttgggcccagcagtgat
gctgggaatggatctgctctgtcaaatttcaatggccctggtaacagcaagtcatctaat
gacaaaccatctctacttgtcaagtccagtctatctggacgtgatgctcccatgtctcat
gcaaaaagctcaaaggtgaacagcatcatatcagatgatgcacccccttctgttcctggg
gtcagtaggcctgctgatggagcagtttcaccagaaaagaatggctttgatgctctaaaa
gtcaagagatccccaaccataagttttgaaaggtccaatcttgttgataataactctggt
ggaggttcaaatgtttccattgagagtaaatctgtatcatcatcctctccttttgcacat
gtttctttcagttccggaggagttaaattagatccaagtgcttcaaaagtatgcagatct
caagctttgagatctgaaaggtcaaatgttgatgttgatgagattgttaatacttcacat
ctatctaagtccagatcatcatctagtgcttctcaaacccatttgaattctagtgttggt
gggcattcggtttcaagcgtgaaacttggaggaaaagttgaaaatgttgaaccaggtgct
gctgctacttctcaaatttctagctattctccaaattctattaatggattgaagtcatca
gtgtggaaagttgttgaccaattcagaggacctaaatgtgggagatatagtaataagggc
cttttcccatatgatttatttgtgaagttatacacttcgaataaggtggaaatgcgaccg
tgtggccttatcaattgtggaaacagctgctatgctaatgctgttctacaatgcttggca
tttactcctcctttgacttcttattttgtgcaagggctccactctaaagcctgtgtaaat
aaagaacggtgcttctcttgtgagtttgaaaatgtaattttaaaggcaaaggaagggaaa
tctccgctttctcccattggcatactatcccaattacaaaatattgggagtcagcttggt
aatgggagagaagaagacgcacatgaattcctgaggtatgcaattgatgcaatgcaatct
gtttgccttaaggaagctagggtgaatgcagtagattcctttgaagaagaagccactctc
ataggccttacatttggaggctaccttcgctcaaagattaaatgcatgaagtgccattac
aagtcagagtggcaggaaagaatgatggatcttactgttgaaatagagggggatataggg
aagcttgaagatgcacttagacgattcacgggtaccgagattctggatggggacaacaag
taccattgtggcagatgcagatcttatgagaaggctaagaaaaagttgacaatattggag
gctcctaatgtccttacaattgcattgaagcgctttcagtcaggtaaatttggaaagctc
aataaatctattcggttcccagagatcctggacttagcaccgtatatgagtggaactagt
gataagtcacccgtatataggctttatggagtgatcgttcacttggatgtcatgaatgct
gcattttctggtcactatgtctgctatgtcaaaaacatccagaacaagtggttcaaagtt
gatgacagcacagttacagctgtggaacttgaaagggttttatcaaaaggcgcttacatg
cttctttatgcaaggtgctcaccgagggccccaagactgataaggagcaggataatatct
tctgatccaaaaaataaatgcagtccctccaaaatcaaggcaacaaacactgcattgaat
tcaagatccatgtctatgcaatccaatgtcgtccaattgcatccggattcaattcctttg
gacaatttggccagtgttgaatcttcctatttgaagctccaccggcttctgaggatttca
gaagaggacttgtcaagtgacaatttctcgtttaccagtggcaattccgatgaaggttcc
tgcagtactgacagcacccatgattctacaagtactgatgacctttctgattacattttt
ggaagttggaactcttggaggaacgcatctgattcagacacctcttcatcttcctcccct
ttgtactcaaggtattcaccccatgctgataagaaccagaatgattcgcatacatattca
aggattgggggtcgtgatctctcggacaggataccaagcggggggaggaagctggtggat
ctggaaggtaaggggggtaattcttttttgcatcctgacacgactgaacaatgtagaaag
ttagcaagtagtaatagttgtagggataaggtgtcgacaaaattaggatcacttaaccct
ttaaatgatgtaaaatccggggtatcctttagaagatcagtaagcgaaagaacagactaa
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