Populus alba (white poplar): 118031884
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Entry
118031884 CDS
T07314
Name
(RefSeq) probable pectate lyase 19
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118031884
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118031884
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
118031884
NCBI-ProteinID:
XP_034892295
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Position
17:11715698..11717471
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AA seq
452 aa
AA seq
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MAVGKARLIFAITLATLIPGLLADIAFFDEVWQKRAEEAKKVTLNSYIPNPEDATDDFNF
EVNNTLVDLDDDGDDAGFELLANSTRRNLKQGKKKYRGPCKVTNPIDKCWRCRRNWARNR
KRLAKCALGFGRRTTGGLKGRVYVVTENSDDDVMNPKPGTLRHAVIQKGPLWIIFSKNMN
IRLSKELIMTSHKTIDGRGHHIHIAYGAGITIQFIQNVIIHGIRIHHIVATSGGNIRDSV
EHYGIRTNSDGDGISIFGSSNIWIDHVSMSRCTDGLIDAIMGSTAITISNSHFTHHNDAI
LLGASDSFSGDELMQVTVAFNHFGQGLVQRMPRCRWGFFHVVNNDYTHWRMYAIGGSKHP
TIISQGNRFIAPPELHLKQVTKRDYAPESEWKTWTWRSENDLMMNGAFFIESGKPRTKRP
HKKFMITAKPGSLATRMTLFAGALDCKSGRKC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgggtaaggccaggctgatctttgctattactcttgcgacattgattcctggg
ctgttggcagacattgcctttttcgacgaagtgtggcaaaaacgagcagaggaagcaaag
aaagtgaccttgaactcctacatacccaacccagaagatgcaaccgatgattttaacttc
gaagttaacaacactcttgtggacttggatgatgatggtgatgatgctggctttgaactg
ctcgcaaatagcactagaaggaacctgaagcaaggaaagaaaaaataccgaggtccatgt
aaggtgacgaacccaattgacaagtgctggaggtgcaggaggaactgggcaagaaaccgt
aagcgtctggcaaaatgtgcacttggttttgggcgtaggacaactggaggattgaaagga
agggtatatgtggtgactgaaaattcggacgacgatgtcatgaacccaaaaccagggact
ttgcgacatgctgtgatccaaaaggggccattgtggatcatattttcaaagaacatgaac
attaggttgtcgaaagagctgattatgactagccataagacgattgatgggcgtggacac
catatacacattgcttatggtgctggaatcacaatacaattcatccagaacgtaatcatt
catggaattcggatccatcacattgttgctactagcggtggcaatattagggattctgtg
gagcactatgggatcaggaccaacagtgatggagatggaatttccatcttcggatccagc
aatatttggatcgatcacgtttccatgtctcgctgcaccgatggtctcattgatgcgatt
atgggatccacagcaataaccatttcaaattcccacttcacccaccacaatgatgccatc
ttgttgggtgcaagtgacagcttctcaggcgatgagcttatgcaagtcaccgttgcgttc
aaccattttggtcagggactggtacagagaatgccaagatgccgatggggtttcttccac
gttgttaacaatgactacactcactggcgcatgtatgctattggtggtagcaaacaccct
accattatcagccagggtaaccgcttcattgcaccacctgaacttcatctgaaacaggtg
acgaagagggactatgcgccggagtctgaatggaaaacatggacatggagatcggagaat
gatctaatgatgaatggagccttcttcattgaatcaggcaaacctagaaccaagagacct
cataagaagttcatgatcacagccaaacccggttcccttgctacaaggatgacactcttt
gctggggcacttgattgcaaatcgggtagaaaatgttaa
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