Populus alba (white poplar): 118032005
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Entry
118032005 CDS
T07314
Name
(RefSeq) uncharacterized protein
KO
K14315
nucleoporin NDC1
Organism
palz
Populus alba (white poplar)
Pathway
palz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118032005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118032005
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118032005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
118032005
NCBI-ProteinID:
XP_034892456
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Position
2:complement(17192305..17196470)
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AA seq
465 aa
AA seq
DB search
HSLTSSSPPLFPSSPFQNHSPPPPLSSSPPVSSALLLCLRRLTLSSAAFVVFVVVAGVSG
VFSVVCFCGFDGVEVIERLVFRGFMFGVLYGLYFVYKKRWVLEFPIIQRPLFYSFKMGLP
LAIKRALKLSNVAYLCSAALLVFLPDQFKSGGTMGQFITEQIILYIGSFSVFLCWELSHH
LHQVLHTKRYLFAPPKGSAAAETNPTEPLLAALEESIPDSLLQYLAYLDLCMVCENNVDA
WRRAAFFEETGETYKKVVAACLRPLEQLTSNLREVLEGCYVGKAHQLSNQLQSPTDSQLD
SKHYESLNNFQKYAWSAKAVAFLTERSHEEDRFGVAQLTGSNAAVLSTLISSLLAIEVFM
GKKTSLQPQHLMGPVTIKWNTPSTGRRDVATANKRGGPLDAKTCAMADVLSNSIYSIVSA
FHDEMLTSTKAGLLEKDWVTKTKPLFGTYELLVQKLRHFLDFRAS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
cattctctaacctcctcttctcctcctctctttccttcctctcctttccaaaaccactcc
cctccgcctcccctctccagctcgccgccggtctcgtccgctttgcttttgtgtcttcgc
cggttgaccctgagttccgccgcgtttgtagtgtttgtggtggttgctggggtatctggg
gttttttcagtggtgtgtttttgtggttttgatggggttgaggtgattgagagattagtg
tttaggggttttatgtttggggttttgtacgggttgtattttgtttataaaaaaagatgg
gttttggagttcccaattattcagcgtcctcttttctatagcttcaagatgggacttcca
ttggcaattaaacgagctttaaagctttctaatgtggcttacttatgctcagctgcgttg
ctagtgtttcttccagatcaatttaaaagtggagggacaatggggcagttcatcactgag
cagatcattctgtatattgggagcttttctgtgtttctctgttgggaattgagtcaccat
ttacaccaggtgctacacacaaaaaggtacttatttgcaccgccgaaaggttccgcagca
gcagagacaaatcccactgagcctctccttgcagccctcgaggagagcattccggattct
cttctgcagtatcttgcatatcttgatctttgtatggtttgtgagaataatgtagatgct
tggcgccgagctgcattttttgaagaaactggtgagacttacaaaaaagttgttgctgcg
tgcttgaggcctctggaacagcttacatctaacttgcgtgaagtcttggaaggttgttat
gttggtaaggcacatcaattatccaatcaattgcagtcgccaactgactctcaactggat
tcaaaacattatgaatcactaaacaactttcagaagtatgcatggtctgccaaggcagtt
gctttcttgactgaacggtcacatgaggaggatagatttggggttgcacaactcactggt
agcaatgctgctgttctctcaacacttatctctagcctgcttgctattgaagttttcatg
gggaagaagacaagcttgcaacctcaacatttgatggggccagttactattaaatggaat
actccaagtacaggaagaagagatgttgcgacagcaaacaagagaggtggtcctctagat
gcaaaaacttgtgccatggctgatgtgctaagcaactcaatctacagcattgtgtctgct
ttccatgatgagatgctcacgagcaccaaagcaggtcttcttgagaaggattgggttact
aaaactaaacccctttttggaacctatgagttgctcgtacagaaactgcgtcatttcctg
gatttccgagctagctag
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