Populus alba (white poplar): 118032371
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Entry
118032371 CDS
T07314
Name
(RefSeq) LOW QUALITY PROTEIN: ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118032371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palz03036
]
118032371
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
palz03037
]
118032371
Enzymes [BR:
palz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118032371
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
118032371
Chromatin remodeling factors
SRCAP complex
118032371
INO80 complex
118032371
INO80 complex (yeast)
118032371
SWR1 complex
118032371
ASTRA complex
118032371
Cilium and associated proteins [BR:
palz03037
]
Motile cilia and associated proteins
Dynein assembly factors
118032371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_19
Mg_chelatase
bpMoxR
AAA_18
AAA_25
TsaE
DnaB_C
AAA_28
AAA_7
nSTAND3
AAA_11
NPHP3_N
Rad17
IstB_IS21
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
118032371
NCBI-ProteinID:
XP_034892960
LinkDB
All DBs
Position
9:12587755..12594633
Genome browser
AA seq
455 aa
AA seq
DB search
MNKEEVQSTTKKQRIATHTHIKGLGLEPSGRAIDMAAGFVGQKEAREAAGLVVDMIKQKK
MAGRALLLAGPPGTGKTALALGISQELGTKVPFCPMVGSEVYSSEVKKTEVLMENFRRAI
GLRVKENKEVYEGEVTELTPEETESITGGYGKSIGGVIIGLKTVKGTKQLRLEASIYDAL
IKEKVAVGDVIYVEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVSKKKEIVQDVTL
HDLDAANARPQGGQDILSLMGQMMKPKKTEITDKLRQEINKVVNGFVDKGTAELVPGVLF
IDEVHMLDMECFSYLNRALESSLSPIVIFAANRGICNVRGTDMNSPHGIPVDLLDPLVII
RTENYGPAEVIQILAVRAQVEVLHXDEESLAYLGEIGQRPSLRHAVQLLSPASIVAKMNG
REEIRKVDLEEVCALYRDAKSSAKLLQDQQEKYIS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaagaagtacagtccactaccaagaaacagagaattgctactcacactcat
atcaaaggccttggccttgagcccagtggaagagcaattgatatggctgctggctttgtg
ggtcagaaggaggctagagaagcagctggtcttgtagttgatatgataaagcagaagaag
atggctggccgtgctctcctcttagctggtcctcctggaactgggaagacagctctggcg
cttggaatttcccaggaacttggcactaaggttccattttgtccaatggttggatcagag
gtctactcgtcagaagttaagaaaactgaggttttgatggaaaattttcgaagggcaatt
ggtctacgtgtcaaggagaataaagaggtctatgagggagaggtgactgaactcacaccc
gaggaaactgaaagtataacaggtggctatggtaaaagcattggtggtgtaattattggg
ctaaaaactgtcaaaggaacaaagcaactaagattggaagccagtatttatgatgccttg
atcaaggagaaggtagctgtgggagatgttatctacgttgaagcaaatagtggagctgtc
aaaagagtgggtagaagtgatgcttttgctactgaattcgaccttgaagcagaggagtat
gtcccgcttcctaagggagaagttagcaaaaagaaagagatagttcaggatgtaacactg
catgatctagatgctgccaatgcgaggcctcaaggtgggcaagatatattgtctttaatg
ggccaaatgatgaagcccaaaaaaactgaaatcactgacaaactacgacaggaaataaat
aaggttgttaatgggtttgttgacaagggtactgcggagcttgttcctggtgttctattc
attgatgaggtacatatgctggatatggagtgcttttcatacttgaatcgtgctttggag
agctctctgtcaccaatagtgatctttgctgcaaatagaggaatatgtaacgtaagaggg
acagatatgaatagtcctcatggcatccctgttgacttgttggacccgttggtgattatc
cgaacagaaaattatggtcctgctgaggtgatacagattttagcagttcgcgcgcaggtt
gaggtgctgcacntagatgaagagagtctagcctaccttggagagattggacaacgcccg
tccttgaggcatgcagttcagctattatcacctgccagcattgtggcgaaaatgaatggt
cgagaagagatacgcaaggtcgacctcgaggaagtatgtgcattatatcgcgatgccaag
tcatccgccaagttgcttcaggatcagcaggagaagtacatttcatga
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