Populus alba (white poplar): 118032727
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Entry
118032727 CDS
T07314
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118032727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118032727
03110 Chaperones and folding catalysts [BR:
palz03110
]
118032727
03029 Mitochondrial biogenesis [BR:
palz03029
]
118032727
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palz04147
]
118032727
Enzymes [BR:
palz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
118032727
Messenger RNA biogenesis [BR:
palz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
118032727
Chaperones and folding catalysts [BR:
palz03110
]
Heat shock proteins
HSP60 / Chaperonin
118032727
Mitochondrial biogenesis [BR:
palz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
118032727
Exosome [BR:
palz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118032727
Exosomal proteins of other body fluids (saliva and urine)
118032727
Exosomal proteins of breast cancer cells
118032727
Exosomal proteins of colorectal cancer cells
118032727
Exosomal proteins of bladder cancer cells
118032727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
118032727
NCBI-ProteinID:
XP_034893393
LinkDB
All DBs
Position
1:225444..229912
Genome browser
AA seq
607 aa
AA seq
DB search
MASTFTAMSSAGTLAAPNARAMDRKFAFSSNKLSSFASISASRFGRPQNVVLPRSRSLKV
NAAKELHFNKDGSAIRKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAK
EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR
GIEKTSRALVNELKLMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE
GKSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEYDNCKLLLVDKKITNARDLIAILED
AIKGGYPVVIVAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGT
VVREEVGLALDKVGSEVLGHASKVVLTKDTTTIVADGSTQEAVNKRVAQIRNLIEAAEQD
YEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL
LRLASKVDAIKDNLENDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLASDNPKF
GYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESVPAGNPM
DNSGYGY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacgtttactgccatgtcctcagctggaaccttggctgctcctaatgcccgt
gccatggataggaagtttgcattttcttcaaacaagttgtcatcttttgcttccatttct
gctagtcgatttggtagaccacagaatgtagttctaccaagatcgcgttctctcaaggtt
aatgcggccaaggagcttcatttcaacaaggacgggtcagcaattaggaaattgcaaact
ggtgtgaacaagcttgcagatctagttggggttacccttggacctaaaggccggaatgtt
gttcttgagagcaagtacggttcacctaaaattgtcaatgatggtgtgactgttgctaaa
gaggttgaattggaggatccagttgagaatattggtgctaagctagtgagacaagctgct
gccaagacaaatgacttggctggtgatgggaccacaacatctgttgttcttgcacagggc
cttatagcagaaggtgtcaaggttgtggctgctggtgcaaaccctgttttaatcactaga
ggcattgaaaagacctcaagagctcttgtaaatgaacttaaattgatgtcaaaagaggtt
gaagacagtgaacttgcagatgtggccgctgttagtgcagggaacaactatgaagttggg
aatatgattgcggaagctatgagtaaagttggtaggaagggagtggtgactcttgaagag
ggaaaaagcgctgataatagtctctatgttgttgagggaatgcagtttgaccgtggttat
atctcaccttacttcgtcactgatagtgaaaaaatggcagttgaatatgataactgcaag
ttgcttcttgttgacaagaaaataacaaatgcaagagatctcattgccattttggaagat
gcaattaaaggtggatatccagttgtaatagttgctgaggacatcgagcaagaagcttta
gctactcttgttgtcaataagcttaggggtgctttgaagattgctgccctcaaagctcct
ggttttggggagcggaagagccagtaccttgatgacatcgctattctgactggaggaact
gttgttagagaggaggtggggcttgccttggacaaagtaggcagtgaggtcctgggacat
gcttctaaagtggttcttaccaaggatacaaccaccattgttgctgatggaagcacccaa
gaagcagtaaataagagagttgcgcaaattagaaatcttattgaggctgctgaacaagac
tatgaaaaggagaagctcaatgaaagaattgcaaaactgtcaggtggtgttgcagtgata
caggttggggcacaaaccgaaacagagcttaaagaaaagaaactgagagttgaagatgct
ctaaatgcaaccaaggctgctgttgaggaaggtattgtggttggtggtggatgcaccctg
ctgagactggcatcaaaggtggatgccatcaaggacaaccttgagaatgatgaagaaaag
gtcggagcagacattgtaaagagagctctgagctaccccttgaaattaatagccaagaat
gctggtgttaatggaagtgtggtcagcgagaaggtgcttgcaagtgacaatcctaagttt
ggatacaatgccgcaactggaaattatgaagatctgatggctgctggaatcatcgatcca
acaaaggtggtcagatgttgcctggagcacgcatcatccgtagcaaagactttcttgatg
tcagattgtgtagttgttgagattaaggagcccgaatcagtgcctgctggcaaccccatg
gacaactcaggatatgggtattga
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