Populus alba (white poplar): 118032736
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Entry
118032736 CDS
T07314
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118032736
04121 Ubiquitin system [BR:
palz04121
]
118032736
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118032736
Membrane trafficking [BR:
palz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
118032736
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118032736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
Rad50_zn_hook
HypA
zf-RING_5
DUF6779
Motif
Other DBs
NCBI-GeneID:
118032736
NCBI-ProteinID:
XP_034893409
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All DBs
Position
1:180047..182563
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AA seq
380 aa
AA seq
DB search
MEEAIAARYWCHMCSQMVNPVMEVEIKCPFCQSGFIEEMSSNTGDNQVPDSEFGSDRALS
LWAPILLGMMGNSRRRRRLRRMEYEEGEDDNDDGEANLGRETEFEHEIESFIRRRRRSRR
SSATILQLLQGIRAGILASESENSEGDRDGERVRDSDRERVILINPFNQNIIVQGSYDSN
NDENQNQNPIGSFGDYFIGPGLDLLLQHLADNDPNRYGTLPAQKEAVEALPTVIIKEPLQ
CSVCLDDFEIGSKAREMPCKHKFHSGCILPWLELHSSCPVCRHQLPAEESKLDSERARNS
SDRREFEDTNSESNISHGISVEEGNSEERSGNGRSFSFPWPFNSLFSSSSGSQSGGNHPS
SAASSSPANAPGSSSQTDEN
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcaattgctgcacggtactggtgccatatgtgctctcaaatggtgaatccc
gtcatggaagttgagatcaaatgccctttttgccaaagtgggttcattgaagaaatgagt
agtaacacaggggataatcaggttcctgattctgaatttggatctgatcgtgccctctca
ctttgggctccaatcttgcttggcatgatgggaaattctcgtcgccgtagaaggcttaga
aggatggagtatgaagaaggtgaggatgacaatgatgatggtgaagcaaaccttggaaga
gagactgagtttgagcatgaaattgaatcattcataaggaggaggaggaggagcagaaga
agttcagctacaatactgcaattacttcaaggaattcgtgctggaattttggcatctgaa
tctgagaactcagaaggagatagggatggggagagggtcagggacagcgacagagagcgt
gtcattttgatcaatccttttaatcaaaatattattgttcagggttcttatgattcaaac
aatgatgaaaaccagaatcaaaatccaatcgggtcattcggtgattatttcattggacct
ggcttggatttgttattgcagcacttggcagataatgatcccaatagatatggaactctg
ccagctcaaaaggaagccgttgaagcattgcctactgtgatcatcaaggagcctttgcag
tgttcagtgtgcttggatgattttgagattggctccaaggcaagggaaatgccatgtaag
cacaagtttcatagtggctgtatattgccatggctggagcttcatagttcctgtccagtt
tgcaggcatcagttgcctgctgaagagtccaagcttgattctgagagagctagaaatagc
agtgatcggagggagtttgaggatactaacagtgaaagtaatattagtcatggaattagt
gttgaagagggaaacagtgaagaaagaagtggaaatgggagaagtttttcctttccatgg
cctttcaatagcttgttttcttcttcatcgggttcacaatctggtggaaaccatccatcc
tcagcagcatcatcctctccagcgaatgcacctggaagctcttctcaaacagatgagaat
tga
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