Populus alba (white poplar): 118032993
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Entry
118032993 CDS
T07314
Name
(RefSeq) ATP-dependent RNA helicase HAS1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
palz03041
]
118032993
03009 Ribosome biogenesis [BR:
palz03009
]
118032993
Enzymes [BR:
palz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118032993
Spliceosome [BR:
palz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118032993
Ribosome biogenesis [BR:
palz03009
]
Eukaryotic type
90S particles
Helicases
118032993
Pre-60S particles
118032993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Nop14
Motif
Other DBs
NCBI-GeneID:
118032993
NCBI-ProteinID:
XP_034893706
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All DBs
Position
1:complement(29546667..29551676)
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AA seq
591 aa
AA seq
DB search
MAERKHNGSAEEEEMKKRKRKRNRAKKETQDKNLNEIEGGEAEEEEEENREVEEVKDKKK
KNKNKKSKKESEEEEKDKEKAEEEEEEEKESVKKMKSGGGIMSTESFDSLGLSEATRKAI
QEMGFENLTQIQARAIPPLLVGKDVLGAARTGSGKTLAFLIPAVELLHNVHFAPRNGTGV
VVICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGAARRGEAERLGKGVNLLVATPGRLLD
HLQNTKGFIYKNLKCLTIDEADRILEANFEEEMKQIIKLLPKARQTALFSATQTKKVEDL
ARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFILLYSFLKRNLSKKVMVFFSS
CNSVKFHADLLRYIQVECFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPAV
DWIVQFDPPDEPKEYIHRVGRTARGEGAKGNALLFLIPEELQFLRYLKAAKVPVKEYEFD
QKKLANVQSQLEKLVANNYYLNKSAKDAYRSYMLAYNSHSMKDIFNVHRLDLQAVAASFC
FSCPPKVNLNMESNASKFRKNTHKGSRNGFNESNPYGRQSDGDEKRQFARY
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacggaagcacaatggatcagcagaggaggaagagatgaagaagaggaaacgt
aagcgaaacagagcaaaaaaagaaacacaagataaaaatctcaatgaaatcgaaggagga
gaagcggaggaggaggaggaggaaaatagggaagttgaagaggtaaaagataagaagaag
aagaataaaaataagaagagtaagaaggaaagtgaagaggaagagaaagataaagagaag
gcggaggaggaggaggaggaagagaaagagtcggtgaagaagatgaaaagtggaggtggg
attatgagtacggaatcatttgactcgttgggattatccgaagccactcgtaaggctatt
caagagatgggatttgagaatttgactcagattcaagccagggcaattccaccactccta
gtaggaaaagatgttcttggtgctgcaaggacaggttctggtaaaactcttgcgtttcta
ataccagcggtagaattattacataatgttcattttgctcctcgcaatggaacgggtgtt
gttgtcatttgcccgacaagagaacttgcaatacagactcatgctgtggcaaaagacctt
ctcaagtatcactctcagactcttggcttggttattggtggtgcagcaagaagaggagaa
gcggaacgccttggtaaaggggtaaatttactagtggcaacccctggtcgacttcttgat
catcttcaaaatacgaagggatttatctataagaatctaaagtgccttacgattgatgaa
gcagacaggatattggaggcaaattttgaggaagaaatgaagcaaattatcaagcttcta
ccaaaggctaggcaaactgctttattttcagctacccaaactaaaaaggtggaggacctt
gctcggttgtcatttcagactactcctgtatatattgatgtggatgatggtagaacgaag
gtcacaaatgaaggtctgcagcaaggctattgtgtagtgccaagtgccaagagatttatc
cttttgtactcctttttgaagagaaatttgtcaaagaaagtgatggtcttcttctcttca
tgtaactccgtcaagtttcatgctgaccttctcagatacattcaggtggaatgctttgat
atccatggaaaacaaaagcaacagaaaagaacctctaccttttttgatttctgcaaagca
gagaaaggcatcttgctttgtactgatgttgcggctcgtggacttgatattcctgctgtg
gactggattgtgcagtttgatcctcctgatgaacccaaggaatacatccacagggttggt
cgaacagctcgaggggaaggtgcaaaaggaaatgccttgcttttcctgattccagaagag
ctacaatttttgcgctatctgaaggcagcaaaagtccctgtcaaggagtatgaatttgat
cagaagaagctggcaaatgttcagtctcagctggagaagttggtggccaacaactactat
ttgaacaagtcagctaaagatgcatacagatcttacatgttggcctacaattcacattct
atgaaggacatctttaatgtccaccgacttgatctgcaggctgttgctgcttcattttgc
ttttcttgtccaccaaaggtgaatctaaacatggaaagcaatgcttccaagtttaggaag
aacacacacaaaggaagccgaaatggtttcaatgagagcaatccttacggaaggcagagt
gatggagatgaaaagcgacaatttgcaaggtattag
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