Populus alba (white poplar): 118033012
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Entry
118033012 CDS
T07314
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118033012
03036 Chromosome and associated proteins [BR:
palz03036
]
118033012
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
118033012
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
118033012
SLIK complex
118033012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_Hrp3
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
SWI2_SNF2
KH_PARP14_5
Motif
Other DBs
NCBI-GeneID:
118033012
NCBI-ProteinID:
XP_034893731
LinkDB
All DBs
Position
1:complement(29909427..29925502)
Genome browser
AA seq
1767 aa
AA seq
DB search
MMAFFRNYTNEAVSQSVLEGKRQGRALGRMLGNEDVDMTSSERELDMNTDVQYESEPDDV
VRLQSNVAADHDAGVNNSELQPSGRKNVAGKWGSSFWKDCQPMGNPGASDSGQDSKSEGR
NAEGSEDNVSNGRDDRLDSEDEEGQKEAGKGGKGHSDVPADEMLSDEYYEQDGEDQSDSV
HYRGFSQSVDLSSRLQKKPVPIKNNVSRRPRGLHNSEGYDDNNNDGDADYEEEVEDDPDD
ADFDPDYGIASGHVGDKDKDWEGEDSDEDNNSDDLVISDGDDGDDSYYTKKPKSRQQGKG
GRNTKSAKENKSLHASGRQKRGKPSFEEDEYSAEDSDSDSDAVSKNMTKRGAHLRKSNAR
STMSTNIGGRNNEVRTSSRSVRKVSYVESDESEEIDEGKKKKARKEEVEEEDGDSIERVL
WHQPRGMAEDAVRNNRSTAPILLSHLFDSAPDWKEMEFLIKWKGQSHLHCQWKSFSELQN
LSGFKKVLNYTKKVMEDVRYRRKFTREEIEVNDVSKEMDLDLIKQNSQVERIIADRITKD
SSENVVPEYLVKWQGLSYAEATWEKDLDISFAQDAIDEYKAREAAIAVQGKMVDLQRKKG
KASLRKLEEQPEWLRGGKLRDYQLEGLNFLVNSWRNNTNVILADEMGLGKTVQSVSMLGF
LQNGQQISGPFLVVVPLSTLSNWAKEFRKWLPDMNVIVYVGTRASREVCQQHEFYNDKKV
GRPIKFSTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLLEFSTKNKLL
ITGTPLQNSVEELWALLHFLDPDKFRSKDDFIHNYKNLSSFNEIELANLHMELRPHILRR
VIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFQDLNKGVRGNQVSLLNIVVELKK
CCNHPFLFESADHGYGGDISTNDSSKLERIILSSGKLVILDKLLVRLHKTKHRVLIFSQM
VRMLDILSQYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINL
ATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLD
HLVIQKLNAEGRLEKKEAKKGSYFDKNELSAILRFGAEELFKEDNDEESKKRLLSMDIDE
ILERAEKVEEKEAEGEDGNELLGAFKVANFCSAEDDGSFWSRWIKPDAVTEAEEALAPRA
ARNIKSYKEDNQPERSNERSNKRKKKGLEASEPQERVQKRRKADYSTPLASMIEGASAQV
REWSHGNLPKRDALRFSRVVMKFGNLNQIDLIVEEVGGTVAAAPPEEQIELFDALVEGCR
EAVEVGNLDPKGPLLDFFGAAVKANDLLSRVQVLQLLAKRISRYENPIAQFRVLTDLKPS
NWSKGCGWNQIDDARLLLGIHFHGFGNWEKIRLDERLGLSKKIAPAELQHHETFLPRAPN
LKERANALLEMELAAVGGKNANAKGGRKASKKERENVLNFSAARGRDKKVKPGSVMVSVQ
TNKNRPQRPQRVEQLAKEEGEMSDNEELCEQFKEVKWMEWCEEVMFDEIKTLKRLNKLQT
TSADLPKEKVLSKIRNYLQLIGRRIDQIVYEYEAELYKQDRMTMRLWKYVSTFSNLSGER
LRQIYSKLKQEQEEDAGVGPSHANGAAYGSVDKDGDSNNFPPLSRNFERQRGYKNASAYP
MSEPINRGHDAGKFEAWKRRRRAEADIQPQFQPPLQRPISNGTRLSDPNSLGILGAGPAD
NRPFIERPLRARQTGFTPKQNFTSGIK
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atgatggcatttttcaggaactatacaaacgaagcagtttcacagagtgtcctagaagga
aagaggcaaggtcgggctttaggtagaatgttgggcaatgaggatgtagatatgacttct
agtgaaagagaattggatatgaacacagatgtgcaatatgaaagtgaaccggatgatgtg
gttaggttgcaaagtaatgtagctgctgaccatgatgctggtgtgaataattcagagctg
cagccttctggaaggaaaaatgtggctggaaaatggggctccagtttttggaaggactgc
caacccatgggtaatcctggggcatccgattctggacaggattccaaatcagagggtaga
aatgcagaagggtcagaagataatgtatcaaatggaagggatgatagattagattcagaa
gatgaagaggggcaaaaagaagcgggtaagggggggaaaggccattctgacgtccctgca
gatgagatgttgtctgatgaatactatgagcaggatggggaggatcaaagtgactcggtg
cattatagggggtttagccagtctgttgatttgagttctaggctgcaaaagaagccggtc
cctatcaagaataatgtctccaggaggccaagaggtttgcacaatagtgaaggttatgat
gacaataataatgatggcgatgctgattatgaggaagaagttgaagatgatcctgatgac
gcagactttgaccctgattatggcattgctagtgggcatgtaggggacaaggataaagac
tgggagggtgaagattcagatgaagataataacagtgatgatttggtcatctcagatggt
gatgacggtgacgattcttattacacaaagaaacctaagagtaggcaacaaggtaaaggt
gggcggaatacaaaatctgccaaagagaacaagtcattgcatgcttctggacgacaaaag
agagggaaaccatcatttgaagaagatgagtattcagcagaggattctgacagtgatagt
gatgctgtttcaaagaacatgaccaagagaggtgcacatcttcgtaaatctaatgcccgg
tcgacaatgtcaacaaacattggtggaagaaacaatgaggttcgaacttctagcaggtcg
gttcgtaaggtgtcatatgttgaaagtgatgaaagcgaagaaattgatgaagggaaaaag
aagaaggcccgaaaggaagaagttgaagaagaagatggtgactccattgaaagggtactg
tggcatcagccaaggggcatggctgaagatgcagtgaggaacaatagatcaacagcacct
attctcttgagccacctgtttgattctgctcctgattggaaagaaatggagttcttgata
aagtggaaaggccagtcacatttgcactgccaatggaaatcattctctgaattacaaaat
ctgagtggttttaagaaggtactgaactacactaaaaaagtgatggaagatgtgaggtac
aggagaaaatttacacgcgaggagatcgaggtgaatgatgtgagtaaggaaatggatttg
gatctaatcaagcaaaatagtcaggtggagagaattattgctgatcgaatcactaaagat
agctccgaaaatgttgtgccagagtatttagtcaagtggcaaggactctcttatgctgaa
gctacttgggaaaaggatttagacatttcttttgcacaagatgctattgatgagtacaag
gcacgtgaggctgcaattgctgtacaggggaaaatggtggatctacagcgtaagaaagga
aaagcaagtttaaggaagcttgaagaacagcctgaatggttgagaggaggaaagcttcgt
gattaccagctcgagggtttgaattttctagttaacagttggagaaacaatacaaatgtt
attttagctgatgaaatgggtcttggaaaaacagtccagtcagtttccatgctcggtttt
ttgcagaatgggcagcagatctctgggccttttcttgttgttgtacctttatccactttg
tctaactgggctaaagaatttagaaagtggcttcctgatatgaatgttatagtatatgtt
ggtacacgtgctagtcgagaggtttgtcagcagcatgaattttacaatgataagaaagtt
gggcggcctataaaattcagtactctgctgaccacatatgaagttgttttgaaggataag
gcagtgctttctaagatcaagtggaattatttaatggttgatgaagctcataggttaaag
aacagtgaagcgcagttgtacacaactcttttggaatttagcaccaagaacaagttgcta
attactggcactccattacagaacagtgtggaagagctatgggctttgcttcatttcctt
gatcctgacaagtttaggagcaaggatgattttattcacaattataagaatcttagctct
tttaatgaaattgagctcgctaatcttcacatggaattgaggcctcacattctcagaaga
gtcatcaaggatgtggagaaatccttgcctccaaaaatagagcgcattctgagggttgaa
atgtctcctctacagaaacaatactataaatggattttggaacgtaacttccaggacctg
aacaaaggagttcgtgggaatcaggtctcacttctgaatattgtggtagagttgaagaaa
tgctgcaatcaccctttcctatttgaaagtgcagatcatggttatggcggggacatcagt
accaatgatagcagtaaactggagaggattatcttaagcagtggaaagctagttatactt
gacaaactacttgtcagattgcacaagacaaaacatcgtgtcctgattttttcccagatg
gtcagaatgttggatatactgtctcagtacatgtcactcagagggttccagtttcaaagg
cttgatggtagcacaaaggctgagttgcgtcagcaggcaatggaccatttcaatgcacct
ggcagtgatgatttctgcttccttctttcaactcgggctggtgggttaggcatcaatctt
gcaactgctgacacagttataatatttgattcagactggaatcctcaaaatgacctgcag
gcaatgagtagagctcataggattgggcagcaagaagttgttaacatctatagatttgtg
acaagcaaaagcgttgaggaagatatcctagagagagctaagaaaaagatggttcttgac
catttggtgatccaaaaactgaacgcagagggtagattggaaaagaaagaagcaaaaaaa
gggagttattttgacaaaaatgagctctcagcaattttaagatttggggccgaggaactt
tttaaagaggacaatgatgaagaaagtaagaaaagactcttgagtatggatattgatgaa
attcttgaacgagcggagaaagttgaagagaaggaagctgaaggagaggatgggaatgaa
ttgttgggtgcttttaaggttgcaaatttttgtagtgctgaagatgatgggagtttctgg
agtcgatggataaaaccagatgctgtaactgaggctgaagaagctttagctcctcgggct
gcaagaaatattaagagttacaaggaggataatcaacctgagagaagtaatgagagaagt
aacaaacggaaaaagaaaggtttggaagcatcagaaccacaggagagagtgcagaagcgt
cgcaaagcagattattctacccccctagcatcaatgattgagggagcatccgctcaagta
agagaatggtctcatgggaatctgcctaagagagatgctttacgtttttctcgtgtggtg
atgaagttcgggaacttgaaccaaatagacttgatagttgaggaggttggtggaacagtg
gcagcagccccccctgaagaacagatagagctttttgatgctttggttgaaggttgtaga
gaagcagttgaagttggaaatctggacccaaagggtcctttgttggatttttttggtgcc
gctgtgaaggcaaatgatctattgagccgtgtgcaagtacttcagctgctagcaaagcga
attagccgttatgaaaatcccattgcacaatttcgagttttgacggacctgaagccttca
aactggtctaagggatgtggctggaatcagattgatgatgcgaggttgcttctgggaatt
cactttcatggatttggcaattgggagaagatacggttagatgaaaggcttggcctttcg
aagaagattgctccagccgaactccagcatcatgagacctttctaccacgtgctccaaac
ttgaaggaacgtgctaatgcactcctggagatggaacttgcagctgttggtggaaagaat
gcaaatgctaagggtggtcggaaggcctccaagaaggagagagagaatgttttgaacttc
tctgcagctcggggcagggacaagaaagtgaagcctgggtctgtaatggtgagtgtacaa
acaaacaagaacaggcctcagagaccccagagagttgaacagttagcaaaagaggagggt
gagatgtcagacaatgaggaattatgtgagcagttcaaggaagtaaaatggatggaatgg
tgtgaagaagtcatgtttgatgaaattaaaaccctgaaacgtcttaacaagttgcagact
accagtgctgaccttccaaaggaaaaggtgctttcaaaaataaggaattatttacagctt
attggacggagaatagaccaaattgtctacgaatacgaggcagagctttataaacaagat
agaatgactatgcgattatggaagtacgtttcaactttttcaaatttatccggtgagaga
cttcgtcagatttattcgaaacttaaacaagagcaagaggaagatgcaggggttggacca
tctcatgccaatggtgctgcatatggttctgttgacaaagacggtgattccaacaatttt
ccacccctttctcgtaattttgagaggcaaagagggtataaaaatgcatcagcctatcca
atgtcagaaccaataaacagaggtcatgatgctgggaaatttgaagcgtggaaacgacgc
agaagagctgaagctgatattcaaccccaatttcagccccccttacaaagacctattagt
aatggtacccgtttatctgaccctaactcattggggattcttggggctggaccagctgat
aataggccttttattgagagacctcttcgagcacgtcaaactggttttactccaaaacaa
aatttcacttcaggtataaagtag
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integrated database retrieval system
