Populus alba (white poplar): 118033145
Help
Entry
118033145 CDS
T07314
Name
(RefSeq) LOW QUALITY PROTEIN: small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00730
Thiamine metabolism
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
118033145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palz03009
]
118033145
Enzymes [BR:
palz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
118033145
Ribosome biogenesis [BR:
palz03009
]
Prokaryotic type
GTPases
118033145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
nSTAND1
AAA_29
AAA_16
AAA_23
AAA_22
AAA_21
ATP-synt_ab
AAA_28
SMC_N
IIGP
Guanylate_kin
Roc
ATPase_2
nSTAND3
Motif
Other DBs
NCBI-GeneID:
118033145
NCBI-ProteinID:
XP_034893904
LinkDB
All DBs
Position
16:1830546..1843825
Genome browser
AA seq
486 aa
AA seq
DB search
MPIPSLSLLRHRTPTFLRHITPFSHHENHHSLLITSFKHQNQPNLSRKPPLNDNLLKAKQ
ILNSKKDFSTLSPILSPNHTPSELSDSQAIGTVAASQANFMRVIVTAGPSRSREIEDSSK
NGSELLCVVRAVLKKIKRRVLVGDKVMVGSIDWVDRRGMIENVFQRSSEILDPPVANVDH
LLVLFSLEQPRLDSFVLTRFLIEAESTGIPITLALNKVELVDQEVLSDWNSRLRSWGYEP
LFCSVDSKMGLDTLASVLRDQTTVILGPSGVGKSSLINALRNKPNSHDEADNWFNPIMGS
KWFEDQRVGEVSTRNGRGKHTTRNVSLLPLGGGGYLADTPGFSQPSLLKVTKQSLAQYFP
EIRTVLSVNEPAKCTFKDCLHVGEPGCIVKGDWERYPLYFQLLDEIKIREEFQLRTFGTK
REDNVRYKTGDMGVQQEEPRLEPKKHRRQSRKRTNQSILDELNELASDEDXLFDDPVLRA
LKNDNF
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcccttccctttccctcctccgccaccgcactcccaccttcctccgccacata
acccccttcagccaccacgaaaaccaccactctctccttatcacctcattcaaacaccaa
aaccagcccaatctctccagaaaacctccactgaacgacaacctcctcaaagccaaacaa
atcctaaattccaaaaaagacttctccactctctctccgatcctctcccctaaccacacc
ccttccgagctctccgattctcaagccatcggcaccgtcgccgcctcccaagcgaacttt
atgcgcgtgattgtcaccgccggaccttctagaagtagagagatagaagattctagtaaa
aatggaagtgaattgctatgcgtggttcgggcggtgttgaagaagataaaacggagagtt
ttggtgggtgataaggtgatggttgggtcaattgactgggtagataggagaggaatgatt
gagaatgtttttcaacggagttcggagattttagaccctcctgtagcgaatgtagatcat
ttgttggttctgttttcgcttgagcagccgcggttggattcatttgtgttgacgaggttt
ttgattgaggctgaatctactgggattccgataacgctcgcattaaataaagtggaactt
gttgatcaagaggtgttgagtgattggaactctaggttgagaagttggggttatgagcca
ctcttttgcagcgttgattcgaaaatggggcttgatactttggcttctgttttgagagat
caaacgacagtgattttgggtccaagtggagttgggaaatctagcttgattaatgctttg
aggaataaacccaattcgcatgatgaagcagataattggtttaatcctataatgggtagc
aagtggtttgaagatcagcgtgttggggaagtttctacgagaaatggtagagggaagcac
actacacgtaatgtttctttgcttccactcggtggaggaggttatctcgctgatactcct
gggtttagccagcctagtttgttgaaagtaacaaagcagtctcttgcacagtattttcct
gagataaggacagtgcttagtgtcaatgaaccggctaaatgcacattcaaagattgcttg
catgttggcgaacctgggtgcatagtgaaaggggattgggaaaggtatcccttgtatttt
cagcttcttgatgagatcaaaatcagggaggaatttcagttaaggacatttggaaccaaa
agggaggataacgtaaggtacaagactggagacatgggtgtccagcaagaagaaccacgc
ctggagcccaagaagcatagaagacagtctcgaaaaaggactaaccaatcaatacttgat
gaattgaatgaactggccagtgacgaggatnntttattcgatgaccctgtcttgagggca
ctcaagaacgataacttttag
DBGET
integrated database retrieval system
