Populus alba (white poplar): 118033184
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Entry
118033184 CDS
T07314
Name
(RefSeq) syntaxin-52
KO
K08503
syntaxin of plants SYP5
Organism
palz
Populus alba (white poplar)
Pathway
palz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
118033184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118033184
Membrane trafficking [BR:
palz04131
]
SNARE
SNAP-25[C] (Qc)
STX8
118033184
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Pox_EPC_I2-L1
STX6_10_61_N
NPV_P10
DUF2721
Use1
DUF5345
DUF6548
SLX9
Motif
Other DBs
NCBI-GeneID:
118033184
NCBI-ProteinID:
XP_034893968
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All DBs
Position
16:2115289..2117633
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AA seq
231 aa
AA seq
DB search
MASPSELWMREFNEASKLGDEISDMISGKNSLPQSGPETQRHLSAIRRKATILTTKLDSL
QSFLSALPGKQPISGKEINRRQEMLKNLSTKVNQMSTALNMAGAANRENLLGSDSKTDNI
INRASGLDNQGLVGFQRQTMREQDEGLEKLDETVTSTKHIALAVNEELTLHTRLLDDLDE
HVDVTNSRMQRVQRNLAFLNKRTKSGCACWIFLVIAIVILIVVVLVLIKYL
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgccatcagaattatggatgcgagaattcaatgaagcatcaaaacttggtgat
gaaattagtgatatgatttctgggaagaattctttgcctcaatctggaccagaaacacag
cgacatctctctgcgatacggagaaaggccactattttgacaaccaaacttgatagtctg
cagtcctttttgtcagcacttccaggcaaacagccaatatcagggaaagagataaatcgg
cgtcaagagatgctgaaaaatctgagtacaaaagttaaccagatgtctactgctctcaat
atggccggtgctgctaacagagagaacttgcttgggtctgatagcaagacagataatatt
ataaatagagcatctggcttggacaaccagggccttgttggttttcaacggcaaaccatg
agagaacaagatgaaggccttgagaaattggacgagacagtgacaagtacaaaacacatt
gcattggctgtcaacgaggaacttaccctacacactaggcttctggatgacttagacgag
catgtggatgtaacgaattcccgtatgcagagggttcaaaggaatttggcttttctgaac
aaacgcaccaaaagtggctgtgcttgctggatctttctggtcattgctattgtcattcta
attgttgtcgtgttggtattgattaaatatttgtaa
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