Populus alba (white poplar): 118033185
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Entry
118033185 CDS
T07314
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
palz
Populus alba (white poplar)
Pathway
palz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118033185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118033185
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118033185
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_RIG_2nd
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_ELP1_1st
PD40
Sod_Fe_N
Motif
Other DBs
NCBI-GeneID:
118033185
NCBI-ProteinID:
XP_034893970
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Position
16:2122661..2128996
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AA seq
449 aa
AA seq
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MPSFPLQGSVTICEINRTLIVADAISDDRAKDAYGKILGMVFSPVPFQPEQLGSTGENQE
SEHQERNNGESVERKGLMKSLQYLVNDSIKRMFYPNCVHLLPEIDLQGVSWHQHRHIIAF
ISGPNQVIVRDYEDSEGKDACVLSNGAQQDIRALEWRPNGGKSLSVACKGGICIWAASYP
GNPATVRSGAASSLGTLTRGSGGRWTLVDFLRSHSDEQTSAISWSPDGRYLASASCESSS
FTIWDVSQGLGTPIRRGLGGISLLKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSG
FVTGATWDPDGHIILIAFSGSLTLGSIHFSSKPPSLDAHLLPVDLLEITTMTGSEGIEKI
AWDASGERLAVSYKGGDDNYKGLVAIYDVRRTPLISASLVGFIRGPGENPKPIAFSFHDK
FKQGPLLSVCWSSGFCCTYPLIFHSHSLP
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgccttcctttcccctgcaaggctcagtcaccatctgcgaaatcaatcgaaccctaatt
gtagctgatgccatctctgatgatcgagccaaggatgcttatggaaaaattctaggaatg
gtgttcagtccagttccgtttcaaccagagcagttgggatcgaccggcgaaaatcaggaa
tctgaacaccaggaaagaaacaatggagagagtgttgagaggaaaggtttgatgaaatca
ttgcaataccttgttaatgactcgatcaagcgcatgttttatcctaattgtgtacacttg
ttaccggagattgatcttcaaggagtgagctggcaccagcatagacatattattgcattt
atttcaggtccgaaccaggttatagttcgtgattatgaagattcagaagggaaggatgcc
tgtgttttaagcaatggggctcaacaagatattagggctcttgagtggagaccaaatggt
ggaaagtcactttctgtagcgtgcaagggtggaatctgcatatgggctgcttcttatcca
ggtaatccagccactgtgaggtctggtgctgcttcctccttgggaactcttactagaggc
tctggaggtcgatggactctagtggattttcttcgtagtcacagtgatgagcaaacaagt
gcaatatcatggagtcctgatggaagatatttggcatctgcatcatgcgagagctcttcg
ttcaccatatgggatgtctcacaaggtctggggacacccatacgacgtggattaggaggc
atttcgttactaaaatggtcacctactggagattacttttttgctgcaaaatttgatgga
acattttatctctgggagacaaacacatggacatctgaaccttggtcttcgactagtggc
tttgtcacgggagcaacatgggatcctgatgggcatataatattgattgctttctctgga
tctttaacattgggttccattcatttttcatcaaagcctccatctttagatgcacatctg
ttaccagttgatttactagagataacaaccatgacgggcagtgagggaattgagaagata
gcttgggatgcttctggtgaaagactggctgtatcttataaaggaggggatgataattac
aaaggtcttgttgccatatatgatgttagaaggactcccctgatttctgcatcactggtt
ggatttattagagggcctggagaaaatccaaagccaattgcattttcgtttcatgacaag
ttcaaacagggaccgttgctttctgtgtgttggagcagtggattttgctgtacctatcct
ctaatatttcactcccatagtcttccataa
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