KEGG   Populus alba (white poplar): 118033290
Entry
118033290         CDS       T07314                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
palz  Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:palz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:palz04121]
    118033290
   03400 DNA repair and recombination proteins [BR:palz03400]
    118033290
Enzymes [BR:palz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118033290
Ubiquitin system [BR:palz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    118033290
DNA repair and recombination proteins [BR:palz03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    118033290
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN DEAD zf-C3HC4_3 zf-RING_2 zf-RING_5 zf-C3HC4_2 zf-C3HC4 Prok-RING_4 zf-RING_UBOX zf-rbx1 zf-ANAPC11
Other DBs
NCBI-GeneID: 118033290
NCBI-ProteinID: XP_034894112
LinkDB
Position
16:complement(2493778..2496964)
AA seq 851 aa
MEAELKEGQEDALGLYMNLDARPDSSSFEDWKYSSSQQIRYETSHVCSFITHIVGLRSHP
AMVFSDHELVTLVRYPQCPRDKYAIKVFNSTSMEVGYLHDEASAALSPLIDAQMINLEGE
VTHSRTGDVEYSVPCLVRVFSKSTDLENVTQSIFGTALCLTGEPRTNPETNEGKRDKEKG
RIEKLGTLEPPKEVIKAKLFDHQKEGLWWLVNKENSDELPPFWEMKDGLYVNVLTRHQTN
TKPETLHGGIFADDYGTGKTLTLLSLIAFDKVGNVPEGTGEEDEGVSVCSGKKRGRVSEM
GAGEPKTHTLLDSNIKESYGGMADKSSSASVSKQTLIVCPSSVCSTWKNQLLEHTEKGSL
KLHKYYGNSKIKDVEELKKYDIVLTTYGAFANESFQRCPLLKIEWWRVILDEADVIKNAD
AKKSLAVSRLTARRRWAVTGAPIQNGSFDLFALIAFLRLDPLSNKSYWQSLLERPLAKKD
GNGFSRLQDLMAAISLRRTKDRVLVGQLRSKTVETVRFKIYGDERERYDQMEAESKKVVR
ELIATGRLNRSYASIRGAVIRLRQMCNDTTPFSSYLKSLLPSDDIGDASEYPELLRKLID
VLREDEDFDCAICYCPPTDAVITICKHVFCKRCIGTCLQRTRSSCPICRGRLSMSDLFSA
PPESSDPKDPRKSTAIIPTKVSTLIKLLKESGEGRPNSKSVVFTIFQKMLVLLEAPLKDA
GFNVLRLDALTDARRRVGIIKKFQSAGQNTVLIANVKVSGAGINLTAASEIYLLEPWWNS
ELEEQAIDRVHQYGQEKNVIIVRLIVKDSIEERILMMQERKKQAIEAFGMQGPKERREVS
LEDLCSLLSLE
NT seq 2556 nt   +upstreamnt  +downstreamnt
atggaagcagaattaaaggaaggacaagaagacgcactgggcctttacatgaatcttgat
gctcgtccagattcttcttcgtttgaagattggaaatattcttcttcacaacaaatccgg
tatgaaaccagccatgtttgttcttttataacccatattgtgggcctcagaagccaccct
gctatggtattcagtgaccatgaattggttacacttgtacgttatccacaatgccctcgt
gataagtatgctataaaggttttcaattctacttctatggaagtgggttaccttcatgat
gaagcttcggctgctttatcccctttaattgatgctcaaatgattaatcttgaaggtgag
gtgactcattcaagaactggagatgttgagtactctgttccttgtctagttagagtcttt
tcaaagtcaactgatctagagaatgttacacaatcgatttttggaactgctttgtgctta
actggtgagcctcgtacaaatcccgagacaaatgagggtaagagggataaagaaaagggt
aggatagagaaattggggactttagagccaccaaaggaggtgattaaagctaaacttttt
gatcatcaaaaggagggtttgtggtggttggtgaataaagagaactctgatgagttgccc
cctttttgggagatgaaagatgggttgtatgtgaacgttttaacaaggcatcaaacgaat
acgaaaccggagactttgcatggcgggatttttgctgatgattatggaaccggcaaaact
ctaactttgctgtctttgattgcttttgataaggttggcaatgtccctgaaggaacaggt
gaggaggatgagggagtgtctgtttgtagtggtaagaagagaggaagggtgagtgaaatg
ggtgctggagaaccaaaaacacatacccttttggatagcaatataaaagaaagttatggg
ggcatggctgataagtcttctagtgcttcggtgtctaagcaaacattaattgtgtgcccg
tcttctgtgtgttcaacatggaaaaaccaactactggagcacacggaaaaaggatcgctc
aagctacacaagtattatgggaatagcaagattaaggatgttgaggagcttaagaaatac
gatatagtgttgaccacgtatggtgccttcgctaatgagtcctttcaaaggtgccctttg
ttgaagatcgagtggtggcgagtcattttggatgaggctgatgtgattaagaatgcagat
gccaagaaaagtttggcagtctctagattgaccgctaggaggaggtgggctgttacagga
gcacccatccagaatggatcgtttgatttatttgccttgattgcatttttgcgattagat
ccactctctaacaaaagctactggcaaagcctgttggagaggccacttgctaagaaggac
gggaatggattctcgcgactgcaggatttaatggcggccatttctttgcggagaacgaaa
gacagggttttagttggccaattacgatcaaaaactgtagagacagttcgctttaaaatt
tatggagacgaacgtgaacggtatgatcagatggaagcagaatccaagaaagttgtccgc
gaactcattgctactggtagactaaacagaagctatgcatctatacgcggtgcagtcata
cgacttcgccagatgtgtaatgatacaaccccgttctcgtcgtatctcaaatcattgcta
ccttctgacgatatcggagatgcatcagaatacccagaattgctccgaaagttgatcgat
gtgcttcgcgaagatgaagattttgactgtgcaatttgttattgtccaccaactgatgct
gtgatcacaatatgtaaacatgtattttgcaaaagatgcattgggacttgcctgcagaga
acaagaagcagctgcccaatttgtcgtggtcgtctttctatgtctgacctgttctcagct
cctcctgaatcttccgatcctaaagatcctagaaaatctactgcaataattcccaccaaa
gtctcaactctcataaaactcctgaaggaatctggggaggggagaccaaacagtaaatca
gtggtttttacaatattccagaagatgttggtactacttgaagcgccactgaaagacgct
ggcttcaatgtattgcggttggatgcattaacagatgctagaaggagagttggaataatc
aagaaatttcaatcagctggacaaaacacagttctaattgcgaacgttaaagtttcagga
gccggtataaacctcacagctgcttccgaaatctacttgttggagccgtggtggaactca
gaactggaggaacaggcaatagaccgtgttcaccaatatggacaggagaagaatgtaata
attgttagattgattgttaaagatagcattgaagaaaggatattgatgatgcaggaaagg
aagaaacaggcaattgaagctttcggaatgcagggacccaaggaacgacgcgaggttagc
ttagaagacctctgtagcctcttatccttggaataa

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