KEGG   Populus alba (white poplar): 118033460
Entry
118033460         CDS       T07314                                 
Name
(RefSeq) coatomer subunit alpha-1
  KO
K05236  coatomer subunit alpha
Organism
palz  Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:palz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:palz04131]
    118033460
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:palz04147]
    118033460
Membrane trafficking [BR:palz04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    118033460
Exosome [BR:palz04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   118033460
  Exosomal proteins of bladder cancer cells
   118033460
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta TPR_COPA_B Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_Aladin Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_At4g14310 Zn_ribbon_19 Aa-Ago_N zf-CHCC
Other DBs
NCBI-GeneID: 118033460
NCBI-ProteinID: XP_034894350
LinkDB
Position
15:13394512..13399903
AA seq 1218 aa
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMR
LTQMNSDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRFFEFSTQRDTQVIPIRRPG
TTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPRDSIARGDAVPEAKRGVGGSAVF
VARNRFAVLDKSSNQVLVKNLKNEVVKKSSLPISADAIFYAGTGNLLCRTEDRVVIFDLQ
QRLVLGELQTPFIKYVIWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLNVPIYITKISGSTIFCLDRDGKNRTIVIDATEYI
FKLSLLKKRYENVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLVTGNLEKLSK
MLKIAEVKNDVMGQFHNALYLGDVRERVKILENAGHLPLAYATAKVHGLEDVVERLAAEL
GDDIPSFPEGKTPSLLVPPAPIMCGGDWPLLRVMKGIFEGGLDNMGKGGADEDEEAADGD
WGEELDMVDVDGLQNGDVSAILEDGEAAEENEEEGGWDLEDLELPPEADTPRASVSARSS
VFVAPTPGMPVSQIWIQRSSLAAEHAAAGNFDTAMRLLNRQLGIKNFVPLKSMFLDLYSG
SHTYLRAFSSTPVISVAVERGWNESASPNVRGPPALVFNFSQLEEKLKAGYKATTTGKFT
EALRLFLGILHTIPLIVVDSRREVDEVKELIIIVKEYVLGLQMELKRREMKDNPVRQQEL
AAYFTHCNLQAPHLRLALQNAMTVCFKNKNLATASNFARRLLETNPPNENQARAARQVMS
AAERSMTDAAQLNYDFRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSQEGQLCTVCDL
AVVGADASGLLCSPSQIR
NT seq 3657 nt   +upstreamnt  +downstreamnt
atgttgaccaagtttgagaccaagagtaatagagtgaaggggctgagtttccacagtaag
agaccatggatccttgctagccttcatagtggtgtgatccagctatgggactatcgtatg
ggcactctcattgatcgctttgatgagcatgatggccctgttcgtggtgttcatttccac
aaatcccagcctctttttgtatctggaggtgatgattacaagattaaagtatggaactac
aaattgcataggtgtctgtttacgctccttggacatcttgattacattcgtactgtgcag
tttcatcatgaatacccatggattgtgagtgctagtgatgatcagaccatccgcatttgg
aactggcagtctcgtacttgcatttctgtgttgacaggacacaatcattatgtgatgtgt
gcctcattccaccctaaagaagaccttgttgtgtcggcttctctagatcagactgttcgt
gtttgggatattggtgctctgagaaaaaagacggtgtcccctgctgatgacatcatgagg
ttgactcagatgaacagtgacctttttggtggtgttgatgcagttgttaagtatgttttg
gaaggccatgaccgaggtgtcaactgggctgcattccaccctacacttcctttgattgtt
tcaggagcagatgatcgccaagtgaagttgtggcgcatgaatgacacaaaggcctgggaa
gtggacacattaagaggacacatgaacaatgtgtcatgtgttatgttccatgccaaacaa
gatataattgtatctaattcagaggataaaagcattcgtgtctgggatgtaactaaacga
actggagtccaaactttccgccgagagcatgaccgattctggatccttgcatcccatcct
gagatgaatcttctggctgcaggtcacgacagcggcatgattgtctttaagttagagaga
gaaaggcctgcttttgctgtgagtggtgattctttgttctatgctaaagatcgcttttta
cgattttttgagttttcaactcaaagagatacacaagtaattcccattcgacgacctggt
actacaagcctgaatcaaagtccaagaactctttcgtacagtcctacagaaaatgctgtc
cttatctgttcggatgtggatggaggatcttacgagctgtacgtcatccctagagacagc
attgctaggggcgatgctgtgccagaggcaaagagaggtgttggtggatctgctgtcttt
gtagctcggaataggtttgctgtgcttgacaagagcagcaatcaagtcttagttaaaaac
ctcaagaatgaagttgtcaaaaagagcagtcttcccatctctgcagatgctatattctat
gctggcactggtaacttgctttgcaggacagaggatagagtggtcatatttgatctccag
cagaggcttgttcttggggagctgcagacaccttttatcaaatatgttatttggtccaat
gacatggaaagtgttgccttgctaagcaaacatgccattatcattgctagcaagaagctt
gtgcaccagtgcactctccacgaaacaattcgtgtaaagagtggagcctgggatgataat
ggtgttttcatttacacgactttgaatcatatcaaatactgcctgcccaatggagatagt
ggcattatcagaaccctcaatgtccccatatatattactaagatttctggaagtactatc
ttttgcttggatcgggatgggaagaataggactattgttattgatgcaacagaatacatc
ttcaaactatctctgctgaagaagagatatgaaaatgttatgagcatgataaggaactcc
cagctttgtggtcaggcaatgattgcttatttgcaacagaaggggttcccagaagtcgct
ctgcattttgtgaaagatgagagaactaggtttaatttggctttagagagtggaaatatt
cagattgctgttgcttcagcaaaggaaattgatgagaaagaccactggtataggttgggg
gttgaagctcttcgccaagggaatgcaggtatagttgaatatgcctaccagaggacaaaa
aattttgagaggttatctttcctttatctcgtaactgggaatttggaaaaactgtctaag
atgcttaaaattgctgaagttaaaaatgatgtcatgggtcagtttcacaatgccctgtat
ttgggtgatgtcagagaacgtgttaagatcctggagaatgctggccatttgccacttgct
tatgccacagctaaggtccatggcctagaggatgttgtggaacgtctagcagctgagttg
ggagatgatattccgtcttttccagagggcaaaacaccatcccttctggtgcctccagcc
cctattatgtgcggtggtgattggccacttctgagagttatgaaaggtatatttgaaggt
gggctggataatatgggcaaaggtggtgctgatgaggacgaagaagctgctgatggtgac
tggggtgaggaactggacatggtcgatgtggatggtttgcaaaatggggatgtctcagca
attttggaggatggggaagcagctgaagaaaatgaagaggagggaggatgggaccttgaa
gatctggagctacctcccgaggcagacacaccaagggcttctgtcagtgcccgctcatca
gtttttgtggctccaactcctggcatgcctgtaagtcagatttggattcagagatcttca
ctcgctgctgaacatgccgcagctggcaattttgatacggctatgcgactactcaacaga
caacttggaattaaaaactttgtcccgttaaagtccatgtttcttgatctttactcaggc
agccatacctatcttcgtgcattttcatctaccccagtgatatcagtggctgttgaacgg
ggatggaatgagtctgccagccctaatgttaggggtcctccagctctggtgttcaatttc
tctcagttggaagagaagcttaaggctggttacaaggccacgacaactgggaaatttact
gaggcacttagactcttccttggcattcttcacacaattcctctgattgttgttgattcg
aggagggaagttgatgaagtcaaggagttgattattatagtcaaagagtatgttttgggt
ctgcaaatggagcttaagaggagggagatgaaagacaatccagtgcgccaacaagagctt
gctgcctacttcacccactgcaaccttcaagctcctcacttaaggcttgctcttcaaaat
gcaatgactgtttgcttcaagaataagaaccttgctacagcatctaactttgccaggcgg
ctactggagacaaaccccccgaatgagaaccaggcaagggctgccaggcaagtaatgtca
gctgcagagaggagcatgacagatgccgctcagctgaactatgatttcagaaatccattt
gtggtatgtggtgcaacctatgttccaatttaccgaggacaaaaggatgtctcttgtcca
tactgtggttcccgatttgtaccaagccaggaagggcagctgtgtactgtgtgtgatctt
gcagtagttggggcagatgcttcagggttgctctgttccccttcccagatacgatga

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