Populus alba (white poplar): 118033477
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Entry
118033477 CDS
T07314
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
palz
Populus alba (white poplar)
Pathway
palz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118033477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118033477
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
118033477
Prokaryotic type
Archaeal type
TFB
118033477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
RB_B
DUF7573
Motif
Other DBs
NCBI-GeneID:
118033477
NCBI-ProteinID:
XP_034894372
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All DBs
Position
15:complement(13190360..13195226)
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AA seq
334 aa
AA seq
DB search
MIFYYQIKQRQQKKKKTERRREKMEDSYCPDCKRLTEIVFDHSAGDTICSECGLILEAHS
VDETSEWRTFSNESSDHDPNRVGGPLNPLLADGGLSTTISKTNGGSNELLSCSLGKWQSR
GANPDRNRIQAFKSIAAMADRLGLVTTIKDRANEIYKKVEDQKPLKGRNQDAILAACLYI
ACRQENKARTVKEICSVVNGATKKEIGRAKEFIVKHLEVEMGHSMEMGTIHAADYLRRFC
SNLGMANQAVKAAHEAVQKSEELDIRRSPISIAAAVIYIIIQLSDDKKPLKDISVVTRVA
EGTIKNSYKDLSPHLSQIIPSWFAKEEDIKNLHA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgatattttattatcaaattaaacaacgacaacaaaaaaaaaaaaaaacagaaagaaga
cgagagaaaatggaagactcatactgcccggactgcaagcgactgacagagatagtgttc
gaccactcggcaggagacaccatctgctctgaatgtggtttaattttggaagcccattct
gtggacgagacatcagagtggcgaactttctctaacgagtcctctgatcatgaccctaac
cgtgttggtggcccacttaaccctcttcttgccgacggtggtctttccactaccatttct
aaaacaaatggtgggtccaacgagcttttgtcctgctctcttgggaaatggcagagccgt
ggcgccaatcctgatagaaaccgtattcaggctttcaagtctattgctgccatggccgac
aggttggggctggttacaaccataaaggatcgagctaatgaaatatataagaaggtagag
gatcaaaaacctcttaaaggacgaaatcaagatgccattttagctgcttgtctctatatt
gcatgtcgacaagagaacaaggcccggactgtaaaagagatttgttctgttgtcaatgga
gccacaaagaaagaaattggacgagcaaaagagtttattgtgaagcatctggaggtagag
atgggtcattcaatggaaatgggaaccatacatgccgcagactatctgagacgcttttgt
tccaatctgggaatggcgaatcaagcagttaaagctgcccatgaagctgtccagaagtct
gaggagcttgacataaggaggagcccaatatcaattgcagcagctgttatttacatcata
attcaactatcagatgataagaagcctcttaaagatatttcagttgtaactcgagtggct
gaaggtaccatcaagaactcgtacaaggatctttctcctcatttgtctcagataataccc
agctggtttgccaaggaagaggatatcaagaatctgcacgcgtag
DBGET
integrated database retrieval system
