Populus alba (white poplar): 118033522
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Entry
118033522 CDS
T07314
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118033522
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118033522
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
118033522
NCBI-ProteinID:
XP_034894428
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Position
10:complement(7339446..7341480)
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AA seq
402 aa
AA seq
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MAIPLSLSILLLILAPSFISCLPVQDPELVVEEVHRSINASRRNLAVLSCGTGNPIDDCW
RCNPNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSGHDDPVNPKPGTLRHAVIQDEP
LWITFARDMVIRLKEELIMNSFKTIDGRGANVHIAGGPCITIQYVTNIIIHGINIHDCRR
GGNAYVRDSPSHYGWRTISDGDGVSIFGGSQVWVDHCSLSNCNDGLIDAIRGSTAITISN
SYFTRHNKVMLLGHSDSYKQDKNMRVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWK
MYAIGGSAAPTINSQGNRFLAPNDRFTKEVTKHEAATQSQWKRWNWRSQGDLMLNGAFFT
PSGAGASSSYARASSLAARPSSLVSSITAGAGALVCKKGSRC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcaattccactctctctttcaatactcctgcttattctagctccaagttttatttcc
tgtttgccagttcaagatcctgaattggtagtggaagaagtacacaggagcatcaatgcc
tctcggagaaacttggccgtactttcttgtggaaccggcaaccccatagatgactgctgg
cggtgtaaccccaattgggagaagaatcggcaaagattagcggattgtgcaattgggttc
ggtaagaatgctatcggtggcagggatggtaagatatatgtagtgacagactccggtcat
gatgacccagtgaatcccaagccaggcactcttaggcatgctgttatacaagatgagcct
ctatggatcactttcgctcgtgacatggtgatcaggctcaaggaagaattgatcatgaac
tctttcaagacaatcgacggaagaggagctaatgtgcacattgctggaggtccatgcatc
actatacaatatgtgaccaacattatcattcatggtataaatattcatgattgcaggcga
ggagggaatgcttatgtgagggattctcctagccattacgggtggaggactatatcggac
ggcgacggggtatcgatattcggaggtagccaggtgtgggtggatcattgctctttatct
aattgcaatgatgggttgattgatgcaattcgtggctccacagccataacaatctccaac
agttacttcactcgtcataacaaggtcatgctcttgggccacagtgatagctataaacaa
gacaagaatatgcgagtcaccatcgccttcaaccactttggagaagggcttgtgcagaga
atgccaagatgtagacatggatattttcacgtggtaaacaatgactatacacactggaaa
atgtatgcaattggtggcagtgctgcccctacaattaatagccaaggcaatagatttctt
gctcccaatgatagatttacaaaagaggtaactaaacatgaggctgcaacacaaagccaa
tggaagcgttggaattggaggtcccaaggggatttgatgttaaatggagcgttcttcacg
ccatctggtgctggagcttcttctagttacgccagggcatccagcttagctgcaagacca
tcttccctggtgagctccatcacagcaggagcaggtgcacttgtttgcaagaagggttca
cgctgctga
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