Populus alba (white poplar): 118033829
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Entry
118033829 CDS
T07314
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
palz
Populus alba (white poplar)
Pathway
palz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118033829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118033829
03036 Chromosome and associated proteins [BR:
palz03036
]
118033829
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118033829
Coactivators
SAGA/TFTC/STAGA complex
118033829
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
118033829
STAGA complex
118033829
TFTC complex
118033829
SAGA complex
118033829
SLIK complex
118033829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
118033829
NCBI-ProteinID:
XP_034894878
LinkDB
All DBs
Position
14:15277492..15286153
Genome browser
AA seq
547 aa
AA seq
DB search
MSIVAKETIEVIAQSIGISNLSEDVALTLAPDVEFRMRQIMQEAIKCMRHSKRTRLTTDD
VDGALNLTNVEPIYGFASGGAVQFKRAIGHRDLFYVDDKDIDFKDVIEAPLPKAPLDTAV
VCHWLAIEGVQPAIPENAPLEEHVCSVVIAPPSDGKISEQNDEFPVDIKLPVKHVLSREL
QLYFDKITDLTVRRSDSTLFKEALVSLSTDSGLHPLIPYFTYFIADEVARGLNDYSLLFA
LMRVVWSLLQNPHIHIEPYLHQLMPSVVTCLVARKLGNRFADNHWELRDFTANLVASICK
RFGHVYNSLQTRLTKTLLNALLDPKRSLTQHYGAIQGLAALGPNVVRLLLLPNLKPYLQL
LEPEMLLEKQKNEMKRHEAWHVYGALLCAAGQSIYDRLKIFPALMSHPAYALLRTNEKVV
TKGPENYQGKRKASMEHMEQPPPKKIATDGPVDVVPSHMQVEPTAPVPLGDSKTGLSTSS
EHTPNYSEAGSRNKKDKGDSQAIKTSAILSQVWKDDLNSGHLLVSLFELFGESILSFIPS
PEMSLFL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagcatagtagcgaaagagacaatcgaagtgatagcacaaagcataggaatcagcaat
ttgtccgaagatgttgcacttactctcgctcctgatgtcgaattccggatgcgtcaaatc
atgcaggaagctatcaaatgtatgcgccattccaagaggactagattgactacagatgat
gttgatggtgcgcttaaccttacaaatgttgagccaatatatggctttgcttctggaggt
gctgtgcagttcaaaagagctattggtcatagagatttgttttatgttgatgacaaggat
attgattttaaagatgtgattgaggcacctttgccaaaagcaccacttgatactgcagtt
gtttgtcactggctcgctattgaaggtgtccaacctgccatcccagaaaatgctccattg
gaagaacatgtttgttctgtagttattgcacctccttctgatggcaaaatcagcgaacaa
aatgatgaatttccagttgatatcaaattgccagttaagcatgtattgtctagggagtta
cagctatactttgataaaatcacagatcttacagtgagaaggtctgattctactctcttt
aaagaagcattagtgagtttgtccactgactcgggacttcatccgttgattccttatttc
acatactttatagctgatgaggttgctcgtggtttaaatgattattctcttctctttgct
ttgatgcgtgttgtttggagtcttctccagaatcctcacatacacattgaaccttatctg
caccaattgatgccatctgtagtcacctgccttgttgcgagaaagttagggaatagattt
gcagacaaccactgggaactcagggacttcactgctaacttagttgcctcaatatgcaaa
agatttgggcatgtatataacagtcttcagacacgtttgacaaaaactttgctcaatgct
cttttggacccaaagcgctcattgactcagcattatggtgcgatacaaggattggcagct
cttggacccaatgtggttcgccttcttctactgccaaatctcaaaccatatctccaactt
cttgaaccagagatgcttcttgaaaagcaaaagaatgagatgaagaggcatgaagcttgg
catgtttatggagcgttgctatgtgcagcgggtcaatccatatacgaccgcctcaagatt
ttcccagcattgatgtcccacccagcatatgctttattaaggaccaatgagaaagttgtc
actaaggggccagaaaactatcaaggtaaacgcaaggcaagcatggagcatatggaacag
ccgccaccgaagaagatagcaactgatggtccagtcgacgtggtgccatcgcacatgcaa
gtggaaccaacagctccagtccctttaggtgattctaaaacaggattgtcgacatcatct
gagcacacgcctaattatagcgaagcaggcagcagaaataaaaaagacaagggtgatagt
caagctataaagacatcagccattctcagtcaggtttggaaggacgacttgaattccggg
catctcctggtatccctgtttgagctgtttggtgaaagcatcctctccttcattccatct
ccggagatgtcattgttcttgtga
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