Populus alba (white poplar): 118033949
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Entry
118033949 CDS
T07314
Name
(RefSeq) transcription initiation factor IIB-2 isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
palz
Populus alba (white poplar)
Pathway
palz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118033949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118033949
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
118033949
Prokaryotic type
Archaeal type
TFB
118033949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
118033949
NCBI-ProteinID:
XP_034894987
LinkDB
All DBs
Position
16:complement(3547690..3551964)
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AA seq
312 aa
AA seq
DB search
MGDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLTDGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLITAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMSNHTVKAATEAVKTSEQF
DIRRSPISIAAAVIYIITQLSDDKKPLRDISLATGVAEGTIRNSYKDLYPHVSKIIPSWY
ASEEDLKNLCGP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgctttctgttcagattgtaagagacacacagaggtagttttcgaccattca
gcaggagacacagtatgttcagagtgtggtcttgtcttagaatctcactcgatcgatgaa
acgtcagagtggagaacttttgcgaatgaatcaggagataatgatccagttcgtgttggt
ggaccaactaatcctttattaacagatggtggtctttctactgttattgctaagcctaat
ggtgcttcaggagagttcttgtccagttctcttggtaggtggcagaatcgtggatccaat
cctgatcgtgggttgattacggcttttaaaactattgctacgatgtctgataggttgggc
cttgttgcaactatcaaggatcgggccaatgagatctacaagaaggtggaagatcaaaag
tccagtagaggaaggaatcaagatgctttattggctgcttgcctctacattgcttgtcga
caagaagacaagccccgaacagtaaaggaaatttgctctgtcgccaatggagccacaaag
aaggaaattggccgagcaaaagaatacatagtgaaacaactgggtttggagactggtcag
tccgtggagatgggaactatacatgctggggattttatgaggcgtttctgctccaatctt
ggaatgtctaatcatacagttaaagctgccacagaagctgttaaaacgtcagaacagttt
gatataaggaggagccctatatcaatcgcagcagcagtcatctatataattactcagctt
tcagatgacaagaagcctcttcgagatatttcactagcaactggagttgctgaaggaaca
atcagaaattcctacaaagatctttatccccacgtgtcaaagattataccatcatggtat
gccagcgaggaagatttgaagaacctttgcggtccttga
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integrated database retrieval system
