KEGG   Populus alba (white poplar): 118033963
Entry
118033963         CDS       T07314                                 
Name
(RefSeq) SART-1 family protein DOT2
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
palz  Populus alba (white poplar)
Pathway
palz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118033963
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:palz03041]
    118033963
   04121 Ubiquitin system [BR:palz04121]
    118033963
Spliceosome [BR:palz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    118033963
Ubiquitin system [BR:palz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    118033963
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 118033963
NCBI-ProteinID: XP_034894999
LinkDB
Position
1:7689125..7696628
AA seq 860 aa
MDMDWSESRHERREERDDVDDKVNGVEKSSKHTRKKSGRGEERERERDRDHKSKDRERSK
KTSDNDVGKDKSRDSKVKDKEHDREKSREKDKDRKDRGKEKERERDREKKEKERERVKEK
HKDREKDRDNDKERERGREKTKERERDREADQDKERSREKDRASRKSNEEDYDGKFQMDY
EDEVDKDTRKQGKVSFRDEDEQSAEGASAGAHTSASELEQRILKMKEERTKKKPESVSDV
LAWVGRSRKIEENKYAAKERAKHLSKIFEEQDNIGQGDSDDEEADQHNAHNLAGIKVLDG
LDKVLEGGAVVLTLKDQNILADGDINEEVDMLENVEIGEQKRRDGAYKAAKKKTGIYDDK
FNDDPASEKKMLPQYDDANADEGVTLDERGRFTGEAEKKLEELRKRLQGTSTSARLEDLN
SSGKISSDYFTHEEMLQFKKPKKKKSLRKKDKLDIDALEAEAVSAGLGIGDLGSRKDGRR
QAIREEQERSEAEMRNNAYQSAYAKADEASKSLRLEQTLQTKVEEEENLVFADDEEDLYK
SLERARKLALKKQEAEASGPLAIAHLASTTLSSQIADDKNPETGESHENKLVFTEMEEFV
SAIQLAEEVHKPDNEDVFMDEDEPPRVSDEEQKDEAGGWMEVPDNSKDENPVNEDEEIVP
DETIHEVAVGKGLSGALKLLKERGTLKESIDWGGRNMDKKKSKLVGIVDDDVGTNNDNKF
KDIRIERTDEFGRIMTPKEAFRMISHKFHGKGPGKMKQEKRMKQYQEELKLKQMKNSDTP
SLSVERMRGAQAQLKTPYLVLSGHVKPGQTSDPRSGFATVEKDLPGGLTPMLGDKKVEHF
LGIKRKPETGFSGAPKKPKI
NT seq 2583 nt   +upstreamnt  +downstreamnt
atggatatggactggtctgaatctaggcacgagcgacgtgaagagagggatgatgtggac
gacaaggtgaatggagttgaaaaatcgagtaagcatacaaggaagaagagcggcagagga
gaggagagagagagggagagggatagggatcataagagtaaagacagggaacggtcgaag
aaaaccagcgataatgatgttggtaaagataagagtagggatagtaaggtgaaggataaa
gaacatgaccgagagaagtctagagagaaggataaggataggaaagatcgagggaaggaa
aaggaaagggagagggatagggaaaagaaggaaaaggaaagggaaagagtgaaggagaag
cacaaggatagagagaaggacagggataatgataaagagagggaaagggggagagagaag
actaaggagagagagagagacagggaagcggatcaagataaagagaggtccagagagaag
gatagggcaagcagaaaaagcaacgaggaagattatgatggcaagtttcagatggattat
gaagatgaagtggacaaggatactcgaaaacaagggaaggtttcttttcgtgatgaagat
gaacaaagtgctgaaggtgcatcagctggagctcacacatctgcctcggagcttgagcaa
cgcattttgaagatgaaggaagaaagaacaaagaaaaaacctgaatctgtttctgatgtt
ttagcatgggttggtaggagtcgcaagattgaggagaacaagtatgctgcaaaggagaga
gccaagcatctctcaaagatttttgaggagcaggacaatattggtcaaggagacagtgat
gatgaggaagcagaccagcataatgctcataatctagctggaatcaaggttctcgatggc
cttgacaaggtattggaaggcggagctgttgttttgacactcaaagatcagaatatactt
gcagatggtgacatcaatgaagaggttgatatgcttgaaaatgtggaaattggagagcag
aagcgccgggatggggcttataaagctgctaagaaaaagacgggtatctatgatgacaag
ttcaatgatgatcctgcttcagagaagaaaatgcttccgcaatatgatgatgccaatgca
gatgagggcgtaactcttgatgaaaggggccgcttcactggtgaagcagagaaaaagctg
gaggagcttcgcaaaaggctacaaggtacttccacaagtgctcgcttagaagatctaaac
tcatccggaaagatctcatcagattactttactcatgaagagatgcttcagtttaaaaag
ccaaagaaaaagaaatctttgcgaaagaaggataagctagatatagatgcccttgaagca
gaagctgtgtcggcagggttgggtattggagatcttggttctaggaaagatgggagaagg
caggccattagagaggaacaagagagatctgaggctgaaatgagaaacaatgcttaccaa
tcagcttatgctaaagcagatgaggcatcaaaatcactgcgactagagcaaactctacaa
actaaagtggaggaagaggaaaatctagtgtttgcagatgatgaagaggatctttataag
tcattagaaagagcaaggaaattagctcttaaaaagcaagaggcggaagcatctggtcct
ctagcaattgctcaccttgcctccaccactttaagcagtcaaattgcagatgataaaaac
cctgaaactggagagtcacatgaaaacaaacttgtgttcaccgagatggaagagtttgtc
tcagctattcagcttgctgaagaagttcacaaacctgacaacgaagatgttttcatggac
gaagatgaaccaccaagagtttctgatgaagaacaaaaggacgaggctggtggatggatg
gaagttccagacaacagtaaagatgaaaatcctgtcaatgaggatgaggagatagttcct
gatgaaaccatacatgaggttgctgttgggaaaggattatctggtgcactgaagttactt
aaagagcgaggtacacttaaagaaagtattgactggggtggcagaaatatggacaagaaa
aagagcaagcttgttggtatcgtagatgatgatgttggtactaataatgataataagttc
aaggatatccgcatcgagaggacagatgaatttgggcgaattatgactccaaaggaagcc
tttcgaatgatttctcataaattccatgggaaggggcctggcaaaatgaagcaagaaaag
agaatgaaacaataccaggaagaattgaagttgaagcaaatgaaaaattcagatacacca
tcgctgtctgtggagcggatgaggggagctcaagctcaattaaagacaccttaccttgtc
ctcagtggtcatgttaagccagggcaaaccagtgatcctagaagtggctttgcaactgtt
gagaaggatctcccaggaggcttaacacccatgctcggtgataaaaaggttgagcacttc
ttggggataaagcgcaagcctgagactggattctctggtgcaccaaagaagcctaagatt
tga

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