Populus alba (white poplar): 118034269
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Entry
118034269 CDS
T07314
Name
(RefSeq) autophagy-related protein 18b
KO
K17908
autophagy-related protein 18
Organism
palz
Populus alba (white poplar)
Pathway
palz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
118034269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118034269
03029 Mitochondrial biogenesis [BR:
palz03029
]
118034269
Membrane trafficking [BR:
palz04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
118034269
Mitochondrial biogenesis [BR:
palz03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
118034269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
BCAS3_WD40
Beta-prop_EML_2
Beta-prop_Vps41
WD40
WD40_MABP1-WDR62_1st
DUF4502
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
118034269
NCBI-ProteinID:
XP_034895402
LinkDB
All DBs
Position
18:complement(12195206..12200704)
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AA seq
379 aa
AA seq
DB search
MSSGSQSSSSSSSQYPILCASFNQDNSGFAISTRDGFKIFDSNTGRLCYERASGAFVVVE
MLYSSSLLAIVGGGEQPSLSPRRLCLFNTTTGTALRELNFLTSVLAVRLNKKRLVVVLQE
KTYIYDSNTLAILDAIDTVPNVKGLCAFSPSLDGCFLALPSSTTKGSVLVYNVMELHSHC
EIDAHCSPLAAIAMSFNGMYIATASEQGTIIRVHLVSEATKSYSFRRGRYPSTIFSMSFG
PSTQLPDILVALSSSGSIHVFSLGLAINQRGRRSSSFLGSLLPDSVNDAFDPAHHPVLHN
VVPAGVKSNVVVRKVDKIADTSLSESVASRATLSVITFNGHFLEYTVDVNTQNESKWSLK
SEFNLLAVISGEEQHFQLV
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtggtagccagtcctcctcctcctcctcctcacaatatccaatcctctgcgct
tcttttaatcaagacaacagtggctttgcgataagcaccagagatggtttcaagatcttc
gattctaatacgggacgtctctgttatgaacgagcttctggagcttttgttgttgtggaa
atgctatatagttcaagcctccttgccattgttggcggcggtgaacagccatctctatct
ccccggcgactctgtttgttcaatactacaaccggaactgctcttcgcgaattgaacttc
ttaacttcagtcctcgccgtccgattgaataaaaagaggcttgttgttgttttgcaagaa
aagacttatatctatgattcaaatacgctggcaatattggatgccatcgatacagttcct
aatgtaaaaggactttgtgcattctctcctagtttggatggctgcttcttggctcttcct
tctagcacgaccaaaggatctgttttggtgtacaatgtcatggagcttcattcacattgc
gagatagatgctcactgttcgccattggctgcaattgccatgtctttcaatgggatgtac
attgcaacagcatctgagcaggggaccataatcagagttcatctggtatcagaagcaact
aagtcatatagttttcgaagggggagatacccatcaacaatattttccatgtcatttgga
ccatcaacgcaacttccagatattcttgtagccctgagtagttcaggttccattcatgtc
ttctcactgggtcttgccataaatcagagaggcagaagatcaagcagttttcttggatca
ttattacctgattctgtaaatgatgcatttgatccagctcatcaccctgtgcttcataat
gttgttccggctggagttaaaagcaatgtggtcgtgcgcaaggtagacaagattgctgac
acaagcttatctgaatctgtagcttctagggccacgctatcagtaataacctttaatggg
cattttttagagtacactgtagatgttaacactcaaaatgaatctaaatggagtttgaag
agtgaatttaatctcttggcagtgatatcaggtgaagagcaacattttcagctcgtatga
DBGET
integrated database retrieval system