Populus alba (white poplar): 118034318
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Entry
118034318 CDS
T07314
Name
(RefSeq) uncharacterized protein
KO
K24755
WD repeat-containing protein 76
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118034318
03036 Chromosome and associated proteins [BR:
palz03036
]
118034318
03400 DNA repair and recombination proteins [BR:
palz03400
]
118034318
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118034318
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
118034318
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
118034318
DSBR (double strand breaks repair)
Other DSBR factors
Others
118034318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
EIF3I
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
118034318
NCBI-ProteinID:
XP_034895462
LinkDB
All DBs
Position
18:12998667..13002215
Genome browser
AA seq
513 aa
AA seq
DB search
MATQKLTEYELKRLENIRRNDEMLAALQLRAKASLLSNATKRSRDGSAKSYKVSPEKKPK
KSETPIVIRRSLRTRGMPPDSNSLDVDSNENSDKATLNQTSINREKPSPCVPGPLKMKDA
FDGTGSDREFIDALLSFERKPKLGVGVKEEFDCFNVVKEEGHDRVLCGPVKRKVESDNLN
CGIKIEKRELEGCVDLGSMSLEPENIARIMPGRIMTVRFFPRNDVNIVAAGNKLGNVAFW
NVDSKGETGNGIFLYRPHTGPISGILFQQSCLSKIFTSCYDGYLRLMDAEKEVFDLVHSC
DDAIFSLSQHPNDVKSLYFGEGRGGLSVWDDRTGSVSSQWTLHEDRINTIDFNPQNPNIM
ATSSSDATVCLWDLRKVDAGKPKSLKIVNHERAVHSAYFSPSGSSLASTSFDDTVGILSG
VNFEDASRVHHCNQTGRWISSFRATWGWDDSFVYVGNMKRGVDIISPAQRRVIRTLQSPH
MTAIPCRFHAHPCRVGMLAGATAGGQVYIWTSS
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcagaaactaacagaatacgagttaaagagactcgaaaacattcgaagaaac
gatgaaatgttggctgctcttcaactccgcgctaaagcctctcttctttctaatgccacc
aaacgctcaagagatgggtcagcaaagtcatataaagttagtccagagaagaaacccaaa
aaatctgagactccaattgttataagacgatctttgcgtacacgaggaatgccgcctgat
tctaattctttagatgttgattctaatgagaattctgataaagcaactcttaatcagact
tcaattaaccgagaaaagccttcgccgtgtgtcccgggtccgctgaaaatgaaggatgct
ttcgacggaactggttctgatagagaatttatagacgcacttttgtctttcgaaaggaaa
cccaaattgggtgttggagttaaagaggagtttgattgttttaatgttgttaaagaggag
ggacatgatagggttttgtgcggcccggttaagaggaaggttgaaagtgataatttgaat
tgtgggattaagatagagaagagggaattagagggttgtgttgatttgggatcgatgagt
ttggagccagagaatattgcaaggattatgccaggaaggataatgacagtgagatttttt
ccgcggaacgatgtaaacatagttgcagctgggaataagcttggtaatgttgcattttgg
aatgtggatagtaaaggggagacaggtaacgggatatttttgtatcgcccgcatactggt
ccaatttctgggattttgttccagcaatcttgtttatccaagatcttcaccagctgctat
gatggatatctccgtttaatggatgctgaaaaggaagtatttgatctagtacactcctgt
gatgatgctatattttctctttctcaacatccaaatgatgtgaagagcttatattttggc
gagggtcgtggaggattgagtgtctgggatgataggacaggaagtgtttcatcccaatgg
accctgcatgaagacagaatcaacaccatagatttcaatccacaaaaccctaacattatg
gccactagttcctcagatgcaactgtttgcctttgggacttgagaaaagtggatgcaggt
aaacccaaaagcttaaagattgtaaatcatgagagggctgtgcattctgcttacttctct
ccctctggaagctcacttgcaagcacaagttttgatgacacagttggtatactaagcgga
gttaatttcgaggatgcttctagggtgcaccattgtaatcagacaggtcgatggatttct
agtttcagagcaacctggggttgggatgattcgtttgtctacgttggcaatatgaaaaga
ggagttgatatcatttctccagctcaaagacgagtaatcaggactctacagagtccccac
atgactgctattccatgcagatttcatgctcatccttgcagggttgggatgctagcagga
gcaaccgctggtggccaggtttacatttggacgtcaagctag
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