KEGG   Populus alba (white poplar): 118034394
Entry
118034394         CDS       T07314                                 
Name
(RefSeq) uncharacterized protein
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
palz  Populus alba (white poplar)
Pathway
palz03022  Basal transcription factors
palz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    118034394
  09124 Replication and repair
   03420 Nucleotide excision repair
    118034394
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:palz03021]
    118034394
   03400 DNA repair and recombination proteins [BR:palz03400]
    118034394
Transcription machinery [BR:palz03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     118034394
DNA repair and recombination proteins [BR:palz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     118034394
SSDB
Motif
Pfam: MAT1
Other DBs
NCBI-GeneID: 118034394
NCBI-ProteinID: XP_034895564
LinkDB
Position
18:12358009..12361712
AA seq 186 aa
MVVSSNNPHNKEILVRRRIASIFNKREEDFPSLKEYNDYLEEVEDMIFDLVAGVDVPAIE
EKIAEYQKENADLILINQARKAEELALAMAASKGPRAQTDNTDGSSQGGISVEAGQYAPT
IAGGQPRPIGIAPQPVPLRGGPDMHGYAEDEETMRIRTERASSAAGWSIEFSKKRAFEEA
FASICV
NT seq 561 nt   +upstreamnt  +downstreamnt
atggtggtctcaagtaataatcctcacaacaaggagatactggtcagaagaaggattgct
agcatatttaataagcgagaagaggattttccatcgctgaaggagtacaatgattacttg
gaggaagtggaagacatgatatttgacttggttgctggagttgatgtccctgctattgaa
gaaaaaattgcagagtatcaaaaagaaaatgcagatctaatattaattaatcaagctcgg
aaggctgaagaattggccttagctatggcagcaagcaaggggcctcgtgcacaaactgat
aatactgacgggagttcccagggaggcatcagtgttgaagctgggcagtatgcacctaca
attgccggagggcagcctcggccaataggcattgctccacaaccagtgcctctcagagga
gggccagacatgcacggatatgcagaagatgaggaaacaatgaggatccgaacagagagg
gcgagtagcgccgctgggtggagcatagagttcagcaagaaaagggcatttgaggaagcc
tttgcaagcatttgcgtgtag

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