Populus alba (white poplar): 118034454
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Entry
118034454 CDS
T07314
Name
(RefSeq) protein EXPORTIN 1A isoform X1
KO
K14290
exportin-1
Organism
palz
Populus alba (white poplar)
Pathway
palz03008
Ribosome biogenesis in eukaryotes
palz03013
Nucleocytoplasmic transport
palz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118034454
03008 Ribosome biogenesis in eukaryotes
118034454
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118034454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118034454
03009 Ribosome biogenesis [BR:
palz03009
]
118034454
03016 Transfer RNA biogenesis [BR:
palz03016
]
118034454
03036 Chromosome and associated proteins [BR:
palz03036
]
118034454
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
118034454
Ribosome biogenesis [BR:
palz03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
118034454
Pre-60S particles
118034454
Transfer RNA biogenesis [BR:
palz03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
118034454
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
118034454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
IBN_N
CRM1_repeat
mTOR_dom
TPR_TNPO3_IPO13_2nd
Motif
Other DBs
NCBI-GeneID:
118034454
NCBI-ProteinID:
XP_034895640
LinkDB
All DBs
Position
13:9801497..9819822
Genome browser
AA seq
1082 aa
AA seq
DB search
MASLVMAAEKFRDLSQAIDVPLLDATVAAFYGTGSKEERVAADRILQDLQNNPDMWLQVV
HILQNTKNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFRMER
LYVNKLNVTLVQILKHEWPARWRSFIPDLVAAAKTSETICENCMVILKLLSEEVFDFSRG
EMTQQKIKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLSTLHAFLSWIPLGYIFES
PLLETLLKFFPMPSYRNLTLQCLTEVAALNFGDFYNIQYVKMCNFFMVQLQAILPLTTNI
PEAYANGSSEEQAFIQNLALFFTSFYKSHIQVLESTQENITALLMGLEYLINICYVDDTE
VFKVCLDYWNSLVLELFEARHNLDNPAVAVNMMGLQVMPLLHGMVDGLGSQIVQRRQLYA
TPMSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHE
DTEKQMLKKLSKQLSGEDWNWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEI
TKGKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLK
IVQKCKRKFVIVQVGESEPFVSELLAGLPTTVADLEPHQIHTFYESVGHMIQAESDPQKR
DEYLQRLMDLPNQKWAEIIGQARQSVDFLKDQDVIRTVLNILQTNTSVASSLGTYFLSQI
SLIFLDMLNVYRMYSELISSSIAEGGPYASKTSYVKLLRSVKRETLKLIETFLDKAEDQT
QIGKQFVPPMMDPVLGDYARNLPDARESEVLSLFATIINKYKAAMIEDVPRIFEAVFQCT
LEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSEQLKLVMDSIIWAFRHTERNIA
ETGLNLLLEMLKNFQASEFCNQFYRSYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFC
LVESGALTEPLWDAATISYSYPNNAMFVREYTIKLLGTSFPNMTASEVTQFVNGLFESRN
DLSAFKNHIRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPNEIQDEML
DS
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttggttatggcggcagagaaatttagggatttaagtcaggcgattgatgtt
cctttactggatgctactgtagctgccttctatggcactggatccaaagaagagagggta
gctgctgaccgtattttgcaggacttgcaaaacaatccagatatgtggctccaagtggtg
cacattctacaaaatacaaagaacctcaacaccaagttctttgccttgcaggtcctagag
ggcgttataaagtatagatggaatgcattgcctgttgaacaacgagatggaatgaaaaat
tacatttctgaagtcattgtacagctttcaagtaatgaggcctcttttcggatggaaagg
ctatatgtaaacaagctcaatgttactttggttcagatactcaagcatgagtggcctgct
agatggcgaagctttatccctgatcttgttgctgcagcaaaaactagtgaaactatttgt
gagaattgcatggttatattgaaacttcttagtgaagaagtttttgatttctcacgagga
gagatgactcaacagaagatcaaagagcttaaacaatcattaaacagcgagtttcaactc
atccatgagctatgcttgtatgtcttgtcagcttctcaaagaaccgagcttattcgagca
acattgtccaccttgcatgcttttctttcttggattcctttgggctatatttttgaatct
cccttgcttgaaacacttctgaaattttttccaatgccatcttatcggaaccttaccctt
cagtgtttgacagaggtcgcggctctaaatttcggggatttctataacatacagtatgtt
aagatgtgtaattttttcatggtccagttgcaggccattcttccactaaccactaatatc
ccagaggcttatgcaaatggatctagcgaagaacaagcattcattcagaatctggcgctg
tttttcacctcgttttataagtctcatattcaagtgctggagtctactcaggagaacata
actgctctgctaatgggtctcgagtatctaattaacatctgttatgttgatgacacagag
gtttttaaggtttgcttggactattggaactccttggttttggagcttttcgaggcacgc
cataatttggacaaccctgcagtggctgtaaacatgatgggactgcaggtaatgcctttg
ctacatggcatggttgatggtttagggtcacaaattgtgcagaggaggcagctttatgct
actccaatgtccaagttgcgaatgcttatgatctgtcgtatggctaaacctgaggaggtt
ttgatagttgaagatgaaaatggtaatattgttcgtgaaaccatgaaggataatgatgtt
cttgttcaatataagattatgagggaaacactaatctatttgtcacatcttgatcacgag
gatactgaaaagcagatgctgaagaaattaagtaaacaactgagtggtgaagattggaat
tggaacaatttgaacactttatgctgggcaattggatccatatctggttccatgatggaa
gaacaggaaaacagatttctagtgatggtcattcgtgatctactgaatttatgtgaaatc
acgaaagggaaagataacaaagctgttattgcaagtaacatcatgtatgttgttggtcag
tacccaagatttctcagagctcactggaagttcttgaaaactgttgtcaataaattgttt
gaatttatgcatgaaactcatcctggagtgcaggatatggcctgtgacacattcttgaaa
attgtacagaaatgcaagcggaaatttgttattgtacaggttggagaaagtgagccgttt
gtatctgaacttctagcaggcctaccaacgactgttgctgatcttgagccacatcagatt
catacattttatgaatctgttggccatatgattcaagcagaatctgatccacagaagaga
gatgaatacctgcagaggttgatggatcttcctaaccagaaatgggctgaaattatcggg
caggcacgtcaaagtgtagattttctgaaggatcaagatgtgatcagaactgtccttaat
atattgcagaccaatacaagtgttgcaagttcccttgggacatactttttatcccaaatt
tctctcatctttttggacatgcttaacgtatacagaatgtatagtgagcttatatcaagc
agtattgcagaaggagggccttatgcatctaaaacatcttatgtgaaacttttgcgatct
gttaagagggagacacttaagctcattgagacatttttggacaaggccgaagaccagaca
caaattgggaagcagttcgtgcccccaatgatggatcctgttcttggtgattatgctagg
aatttgcctgatgctagagaatcagaagttttgtcactttttgcaacaattataaacaag
tacaaagctgcaatgatagaagatgtacctagaatatttgaagctgttttccagtgtacg
ttggagatgataaccaaaaattttgaagattatccagaacatcgccttaagttcttctca
ttactccgtgccattgctacacattgtttccctgccttgattcgtttgtcaagtgagcaa
ctgaagctagtgatggattcaatcatatgggcattccgtcatacagagaggaacatagct
gagactggtctaaacctattgttggagatgctgaagaactttcaggcttcagagttctgt
aatcagttctacaggtcatactttttgacaattgagcaggaaatatttgctgtcttgaca
gatacatttcacaaacctggttttaagttgcatgtcttggtgctgcaacacttgttttgc
ttggtcgagagtggtgctttgacagagcctctgtgggatgctgcaacaatctcttattca
tacccaaataatgcaatgtttgttcgtgagtataccattaaacttctgggtacatcattc
ccaaacatgactgcatcagaggtcactcaatttgttaatggactttttgagtcaagaaac
gacctgtctgcatttaagaatcacatccgagactttcttgtgcaatcaaaggaattctcc
gctcaggataataaagatctctacgccgaagaggctgctgctcagagggaaagagagcga
caaagaatgctttccattccagggcttattgcccctaatgaaatacaagatgagatgtta
gattcatag
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