Populus alba (white poplar): 118034614
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Entry
118034614 CDS
T07314
Name
(RefSeq) protein argonaute 5
KO
K11593
eukaryotic translation initiation factor 2C
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118034614
03036 Chromosome and associated proteins [BR:
palz03036
]
118034614
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118034614
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
118034614
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
118034614
microRNA pathway
RISC loading complex
118034614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
118034614
NCBI-ProteinID:
XP_034895842
LinkDB
All DBs
Position
9:774418..780899
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AA seq
974 aa
AA seq
DB search
MSRRGGGRRSETRRDQDSSTPSPSFQRGGGGGGGRGRGGRGGSTPAPSPTPVRAPTSRAP
SATAGPSAKPAPQAAYTAAAAASSSSSVGELSQETSKKLTLGETITTGGLVPVSSKAIVP
PRRPDYGKIGKKCVIRANHFVVEVSDRDLFHYDVAITPEITSKKVNRDVISQLVRSYRES
HLGNRMPAYDGRKSLYTAGALPFEAKEFVVKLAEKGDAASSSSSVKKERQFKVAIKYASK
VDMYHLKEFLSGRQADAPHETIQILDIVLRASPSEKYITVGRSFFSPELGPKGDLGDGIE
YWRGYYQSLRPTQMGLSFNIDVSARSFYEPILVTEFVAKYFNFRDLSRPLYDQERVKVKR
ALRGIKVQITYSDCTKSYKITDITNLPVNKTMFTLDDKKTKVSVYQYFLERYNIKLKYTS
LPPLQAGTDAKPIYLPMELCQIAGGQRYTKKLNERQVTALLRATCQRPSARENNIKQMVR
QNDYSRNALVRNEFGIQVKEELTLVDARVLPPPMLKYHDTGREARVDPRFGQWNMIDKKM
VNGGRIDFWTCLNFSTRVHRELPPEFCWQLMDMCNNKGMEFNPEPIIPIRSADSRQIEKA
LHDVHKQCTAELANQKGKQLQLLIIILPDVTGSYGKIKRICETELGIVSQCCQPQQAKKL
SKQYLENVALKINVKAGGRNTVLNDAFHRRIPLLTDVPTIVFGADVTHPQAGEDAGPSIA
AVVASMDWPEVTKYRGLVSAQAHREEIIEDLYKNYQNPKGGLVHGGMIRELLLAFYRSTG
QKPFRIIFYRDGVSEGQFSQVLLHEMQAIRQACGSLEDGYGPPVTFVVVQKRHHTRFFPA
DHSRRDQTDKSGNILPGTVVDTTICHPTEFDFYLNSHAGIQGTSRPTHYHVLFDENNFSS
DGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGETSDAGSSGGTAEFRPL
PVIKENVKDVMFYC
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccgtggtggcggccgacgatccgaaactcgtcgtgaccaggactcatcaact
ccgtcaccttcatttcagcgcggtggtggtggtggtggaggccgtggccgtggtggaaga
gggggctccactcctgctccgtctccaactccagttcgtgctcctacctcgagggcaccc
tccgcaaccgcaggtccttcggcaaaaccagctcctcaagcggcttatacagcggcggcg
gcggcttcgagttcctcttcagtcggggagctgagtcaagagacctcaaagaagttgaca
ttgggagagaccattacgacgggagggctggtgcctgtctcttcaaaggcgatagtgcct
ccgcgacgaccagactatggaaagatagggaagaaatgtgtgattagagcgaatcatttt
gtagttgaggtttctgatagagatctctttcactacgatgtggcaataactcctgaaatt
acatcaaaaaaagtcaatagagatgtaatatctcaacttgttcgttcttaccgtgagtct
catctgggcaaccggatgccagcttatgatggcaggaaaagtctatacactgctggggca
ttgccttttgaagcaaaggaatttgttgtgaagttggctgagaagggtgatgctgctagt
tcatccagctccgtcaaaaaggaacgtcaatttaaggtggccatcaaatatgcatccaaa
gttgatatgtatcatttgaaggagttccttagtggtagacaagcggatgctccacatgaa
accatacaaatcctagacattgttctcagagcatcaccatcagaaaagtacattactgtt
gggcggtcatttttctcacctgagttgggtccaaaaggcgatctcggtgatggaatagaa
tattggagggggtattatcaaagtcttcggccaacccaaatgggactatctttcaatatt
gatgtgtcggccagatccttttatgagccaattttggtaactgagtttgtagcgaagtac
tttaattttagagacttatcaaggcctctttatgatcaggagcgtgttaaggtgaaaagg
gccttgagaggaatcaaagtacaaattacttacagtgactgcactaaaagctacaagatt
actgacataactaatctaccagtaaacaaaacaatgtttactctggatgataagaaaaca
aaggtgtcagtctatcagtattttttggagagatacaatattaagctgaaatatacgtct
ttgcctccccttcaagctggaactgatgcaaaacctatttatttgcccatggagctttgt
cagattgctggaggacaacgatacacgaagaaattaaatgaaagacaagtcacagccctt
ttaagagcaacctgtcaacggccttctgctagggaaaataatattaaacagatggttagg
caaaatgattacagcaggaatgcgcttgtgaggaatgaatttggaattcaagtgaaagaa
gaactcacattggttgatgctcgagtattaccccctcccatgcttaaatatcatgataca
gggcgagaagctagagtggatccgcgctttggacaatggaacatgatagacaagaaaatg
gtgaatggaggcagaattgatttctggacctgtttgaacttctctacaagagtgcacaga
gagttgccacctgaattttgttggcagttaatggatatgtgcaataacaaaggaatggaa
ttcaacccagaacccattattccaatacgctcagctgattctaggcaaattgagaaggct
cttcatgatgttcataagcaatgcactgcagaacttgcaaatcagaaggggaaacagctt
cagctgctgatcattattctacctgatgtcaccggatcctatgggaaaatcaaacgtatt
tgtgaaactgagttaggaatagtttcacagtgctgtcagccccagcaggcaaagaagctt
agcaaacaatacctggaaaatgttgctctcaaaattaatgtgaaggctgggggacgaaac
actgtattgaatgatgcttttcatagaagaattcctcttcttactgatgttcctactatt
gtttttggtgctgatgtaacccatccacaagcgggagaagacgcaggcccgtcaattgca
gcagtagttgcttctatggattggccagaggtaaccaagtatagaggacttgtctctgca
caggctcaccgtgaagaaattattgaggatctttacaaaaattaccagaatccaaagggg
ggtttagttcatggtggaatgatcagggaactgttacttgctttctacagatccaccggc
caaaaaccttttagaattatattctacagagatggtgttagtgaaggtcaattcagccaa
gttctgctgcatgagatgcaggcaatacgacaggcatgtggctccctagaagacgggtat
ggtcctccggttacctttgtagtagttcagaaaaggcatcatacacgctttttccctgct
gaccatagcaggcgtgatcagactgacaagagtggcaatatcttaccaggtacagttgtt
gatactacaatttgccaccctacagagtttgacttctaccttaacagtcatgctggaatt
cagggaaccagcagacctacacattaccacgtgttgtttgatgaaaacaacttcagttct
gatggtttacaaaccctcaccaacaatttgtgctacacgtatgcaagatgcactcggtct
gtttccatagtgcctcccgcatattatgctcacttggcagcttttagggcgcgatattac
attgagggtgaaacatcagatgctggttcatctggtgggactgctgagttccgtcctctt
ccggttatcaaagaaaatgtcaaggatgttatgttttactgttga
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