Populus alba (white poplar): 118034645
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Entry
118034645 CDS
T07314
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118034645
04121 Ubiquitin system [BR:
palz04121
]
118034645
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118034645
Membrane trafficking [BR:
palz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
118034645
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118034645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
Zn_ribbon_FGT1_2
zf-RING_5
Rad50_zn_hook
zf-RING-like
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
118034645
NCBI-ProteinID:
XP_034895872
LinkDB
All DBs
Position
9:complement(4154864..4156423)
Genome browser
AA seq
342 aa
AA seq
DB search
MASTTTTTTSCWCYRCSRFVTVSPQNEDEEHSHTSNITCPHCDGGFVEEIQSNSTSDIRQ
NRSRVSNLTRNRRNAGDRSSFNPVFVLRGTTPAAAAEDNEDRSAYEFYYDDGIGTGLRPV
PEMMSEFLMGSGFDRLLDQLSQIEINSLGRSVPNPPASKVVIESMPSVEINETHVISETY
CAVCKEAFEIGNEAREMPCKHIYHSDCIFPWLAMRNSCPVCRHELPVENSRDEEVEGELV
GLTVWRLPGGGFAVGRFSGGRRGGEREFPGVFTEMDGSGNGELNGNSMPSRDWDSWVTRR
SRRRESTSGIGGFRRVFRGMASFLRRIRPNSSSRMRDGSEEP
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacgacgacgacgacaacgtcgtgttggtgttacagatgctcacgattcgtc
accgtttcgcctcagaacgaagacgaagaacacagccacacaagcaacatcacgtgtcct
cactgcgacggtgggttcgtcgaagagatccaatccaactccacctctgatatccgtcaa
aaccgtagtcgggtttccaaccttacccgaaaccgccgcaacgccggcgaccggtcttcc
tttaacccagtgttcgtcctccgcggaaccacccctgccgccgctgctgaagacaacgaa
gatagaagcgcgtacgagttctactatgacgatggaatcggtacgggtctccgacccgta
ccggagatgatgtctgagtttttaatgggttcaggttttgaccgtttactagaccagtta
tcacagatagagataaacagtttaggccggtcggttcctaacccgccggcatcgaaagtc
gtgattgaatcaatgccgagtgtagaaataaacgaaacgcatgtgatttcggagacgtac
tgtgcagtgtgtaaagaggcgtttgagataggaaacgaggctcgtgagatgccctgtaag
cacatttatcattctgattgcatttttccttggcttgcgatgcgaaattcttgtcccgtt
tgcaggcacgagttgcctgtggagaattccagagatgaggaggtggaaggggaacttgtg
gggttaactgtatggaggttgcctggtggtgggtttgctgttgggaggtttagtgggggg
aggagaggtggggagagagagtttccgggtgtttttacggagatggatggtagtgggaat
ggtgagcttaacgggaacagtatgccgtctcgtgattgggattcttgggtgactaggagg
agtagaagaagagagagtactagtggtattgggggttttaggagagtttttcgtggtatg
gcttcgtttttaaggaggattaggcctaattcgtcgtcaagaatgcgtgatggatctgaa
gaaccttga
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integrated database retrieval system
