Populus alba (white poplar): 118034660
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Entry
118034660 CDS
T07314
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
palz
Populus alba (white poplar)
Pathway
palz03013
Nucleocytoplasmic transport
palz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118034660
03015 mRNA surveillance pathway
118034660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118034660
03041 Spliceosome [BR:
palz03041
]
118034660
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118034660
Spliceosome [BR:
palz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
118034660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
118034660
NCBI-ProteinID:
XP_034895896
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All DBs
Position
9:4335041..4340598
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AA seq
883 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAPELDHLVDTRKMKMDVIRPWIATRVTELL
GFEDEVLINFIYGLLDGKEVNGKEVQISLTGFMEKNTGKFMKELWTLLLSAQKNESGVPQ
QFLDAKEEETRKKQAEVDRIANEIQKKKEIEKEMRELEREKLKKMDIEVEKKANNAMEPA
SKHMLPKGSSGHAEDEKETDMRNGARGRKRASRSPHSTDSSFSSPRGSPSRTSRSILNSR
SHSGHKSRSVSRSPEARRQRSISSDRMRSLRRRSITPRRRRSPRDSPSPPRRKSSYSGHI
SRSPLRHRSPSPIRRRLRSPFQRRSPLPLHDRSPSPVRRRRSPSPIRRRRSPSPIRRRRS
PSPIRRRRSPSPIRRRRSPSPMRRHRSPSPVRRRSPFPMRRRSPLPLRRRSPSPVSRRSP
SPRRRRSPPSLRRRSPSPVRRGYQRSPSPMQHRSSIISRKRSPSPHRQSPSPYTSSSPSP
VQHRSPSPVKSPKEHRSPVQSPGERVRLQQKLLPIPRRSSNSLRSPQRGQKDRKDLCNRL
PALSPSPERSPLRPESPPVARKSASKDGRSPSPYESPARQRKEQITRDGSLSPQKQRGRK
PLKDSPETSKDHEETGHTREGGDYYSRSSWKRSIHPSNINKQKDSPVKVHYKDEQSSERL
AGRQTTDSRNYPDNMDSRKKDQDIKIGKSSGRGADHDLDAKKSPTLYKDEKDRSCLNSFK
DSDKHPKSETAAVTAEKVHHSNGSGAQDSGSKESDKHRAEKREKSKHKRSHRLEVASDDD
GSYGSEIEERKEAKRRRKEEKKLRKEEKHRRREERRRRREERRAEKLKLKDCDDASSSSD
EHVGRRESHPSDDEEIESDQKKLEIELRKKALESLKAKKGINR
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgggtttttccggggcacgtctgctgatcaagacactcgattctccaacaag
caagcgaagctgttgaagtcgcagaagttcgctcccgaattggaccatctggtggatacg
aggaaaatgaagatggatgttattagaccgtggattgctactagagtgacggagcttctc
ggctttgaagatgaagttcttatcaacttcatttatggcctgcttgatggaaaggaagtg
aatgggaaggaggttcaaatatcgcttacaggattcatggagaaaaacactgggaagttt
atgaaagagctttggacacttcttcttagtgcgcagaagaatgaaagtggtgttcctcaa
cagtttttggatgccaaagaagaagaaacacggaagaagcaggcagaggtcgataggata
gcaaatgaaatccagaagaagaaggagattgagaaggagatgagagaacttgagagggaa
aaattgaagaagatggacattgaggttgaaaagaaagccaataatgctatggagccagcc
tcaaagcacatgctgcctaagggttcaagtggtcatgctgaggatgagaaagaaactgac
atgaggaatggtgcaagaggaaggaaaagggcttctaggtctcctcattcgactgatagt
tcattttcatctcctcgaggctcaccttctaggactagcaggtcaattttaaattcaaga
agtcattcagggcataagtcaagaagtgtgtctagatcacctgaagcacgaaggcagcgc
tccatatcttctgatagaatgcgctcattaagaaggcgctcaattactcctcgtcgaagg
cgttcacccagagattcaccctccccacctcggaggaaatcatcatactccgggcatata
tctagatctcctttaagacataggtcaccatcccctatacgacgtagattgcgttctccc
tttcaacgcaggtcacccttacccttgcatgatagatctccttcaccagttcgacgtcgt
agatccccttcacctattcgacgtcgcagatccccctcacctattcgacgtcgtagatcc
ccctcacctattcgacgacgcagatccccttcacctattaggcgtcgtagatccccttca
cctatgaggcgccatagatccccttcccctgtacgccgtagatctcctttccctatgcgc
cgtagatccccgttgcctttaaggcgtagatcaccttcacccgtgtcacgtagatcacct
tcacctcgtcgtcgtagatcacccccttccttacgacgcagatcaccatctcctgtacgt
cgggggtatcaaaggtctccttctcctatgcaacataggtcatctattatttcacgcaag
agatctccatctcctcatcgtcagtctccttcgccttacacttcaagctctccatctcct
gtccagcataggtccccttctccagtgaaatctccaaaggaacacagatcacccgtgcag
tctcctggagaaagagttagattacaacaaaaattgttgcctattccacgccgttcctca
aattctttaaggtcaccacaaagaggtcagaaggatcggaaagatttatgcaatagattg
ccagctttatctccttcaccagagaggtccccactccggccagaatccccaccagttgca
agaaagagtgccagcaaagacggaaggtcccctagtccatatgagagtcctgccaggcaa
agaaaagagcaaattacacgtgatggtagcttaagtcctcagaaacaaagagggaggaaa
cctcttaaggatagtccagaaactagcaaagaccatgaagaaactggtcacactcgggag
ggtggggactattattctaggtcatcatggaaacgatctatacatccttctaacattaac
aagcagaaagattctcctgtgaaggttcactacaaggatgagcaatcttctgaaagatta
gccggtcgtcagactactgattccagaaactatccagataacatggattcgaggaagaaa
gaccaggatataaagattgggaagtcttctgggaggggcgctgatcatgatcttgatgca
aaaaaatctccaactttgtacaaggacgagaaagaccgttcatgcttaaacagttttaag
gatagtgataaacatcccaaatcagaaaccgcagcagtgacagctgaaaaagtccatcat
agtaatggcagtggtgcacaggattctggttctaaggaaagtgataagcatagagcagaa
aagagggaaaagtcaaagcataaaaggtcgcatcggcttgaagtggcttcagatgatgat
ggcagctatggttctgaaattgaagagaggaaagaggctaaaaggaggaggaaggaagaa
aagaaattgcgaaaggaggagaagcatcgacggcgtgaggagcgacgccgtaggagggag
gaacggcgtgcagagaagctaaaattgaaggattgtgatgatgccagctcatcttctgat
gaacatgttggcaggagggagtcccatccaagtgatgatgaggagatagagtctgatcag
aaaaaacttgagattgagctaaggaagaaggctcttgaatcacttaaagcgaagaagggc
atcaatcgctaa
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