Populus alba (white poplar): 118034705
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Entry
118034705 CDS
T07314
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118034705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118034705
03110 Chaperones and folding catalysts [BR:
palz03110
]
118034705
03029 Mitochondrial biogenesis [BR:
palz03029
]
118034705
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palz04147
]
118034705
Enzymes [BR:
palz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
118034705
Messenger RNA biogenesis [BR:
palz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
118034705
Chaperones and folding catalysts [BR:
palz03110
]
Heat shock proteins
HSP60 / Chaperonin
118034705
Mitochondrial biogenesis [BR:
palz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
118034705
Exosome [BR:
palz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118034705
Exosomal proteins of other body fluids (saliva and urine)
118034705
Exosomal proteins of breast cancer cells
118034705
Exosomal proteins of colorectal cancer cells
118034705
Exosomal proteins of bladder cancer cells
118034705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
gpW
Motif
Other DBs
NCBI-GeneID:
118034705
NCBI-ProteinID:
XP_034895940
LinkDB
All DBs
Position
9:complement(1596408..1600466)
Genome browser
AA seq
586 aa
AA seq
DB search
MATSNALSTASILCSPKQGGLRRKGNQQHNSRLNFGQSTRRFAVRANAKDIAFDQDSRAA
LQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVQGLVEELEKRAR
PVKGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEID
RGYISPQFVTNPEKLICEFENARVLVTDQKISAIKDIIPLLEKTTQLRSPLLIIAEDVTG
EALATLVVNKLRGILNVSAIKAPSFGERRKATLQDIAILTGAEFQASDLGLSIENTSIEQ
LGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGV
AVIQVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTHVPAIKEKIQDA
DERLGADIVQKALVAPASLIAQNAGIEGEVVVEKLKDSEWEIGYNAMTDKYENLVEAGVI
DPAKVTRCALQNSASVAGMVLTTQAIVVEKPKPKTPVGAPPQGLTV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatctaatgctctctccacagcttccattctttgctctcctaaacagggaggg
ttgaggaggaaagggaatcaacaacacaactcaaggctgaattttgggcaatcaaccaga
agattcgcggtgcgagcaaatgcaaaggatattgcttttgatcaggactcacgggctgct
ctccaatctggcattgataagcttgctgatgctgttgggcttactcttggtcccaggggt
agaaatgttgtcttagatgaatttggaagtccaaaggtagttaatgatggggtaacaatt
gcgcgagctattgaactacctgatcccatggaaaatgctggtgcagcactcatcagagag
gttgcaagtaaaactaatgactctgctggtgatggaacgacaactgcatcagttcttgct
cgggaaataatcaaattaggacttttgagtgtcacgtctggtgcaaatccagtttctatt
aaaaagggaattgataaaactgtgcaaggcttggtagaagagctagagaagagggccaga
cctgttaagggtcgtgatgacattaaagctgttgcaacaatttctgctggaaatgatgaa
ctcattggcacgatgattgctgatgcaattgacaaggttgggcctgatggtgttttatca
attgagtcatcatcttcctttgagaccacagttgaggttgaagaaggaatggagatagac
agaggttatatctctcctcaatttgttacaaatccggagaagttaatttgtgaatttgag
aatgctagagtgctggttacagatcaaaagatttctgcaatcaaagacataattcccttg
ctagaaaagactactcaattgagatctcctttgcttataattgctgaggatgtaacaggt
gaggctttggctacccttgtggtgaacaaactgcgtggtatccttaatgtttccgctatc
aaggctcctagttttggtgaaaggaggaaagctacgctgcaagacattgccattttaaca
ggagctgagttccaagccagtgatcttggtttaagcattgaaaacacatcaattgagcag
cttggtttggccaggaaggttacaatcagcaaggattccaccaccatcattgctgatgct
gcatcaaaggatgagttgcaagctaggattgcacagctgaaaaaagagctgtccgagact
gattctgtgtatgactcggagaaactggctgaaagaattgccaaattgtctggtggggtt
gctgttatccaagtgggtgctgcaacggagactgagcttgaggatcgcaaactccgcatt
gaggatgccaagaatgcaacttttgctgccatagaagaaggaattgtgcctggtggtggt
gctgctttggttcatctctcaacccatgttcctgcaatcaaggaaaaaattcaagatgca
gatgaacggttaggtgctgacatcgtgcagaaggcactggtagcacccgcatcgttgata
gctcaaaatgctggaattgaaggtgaggtggttgttgagaagctaaaggatagtgaatgg
gagattggctacaatgccatgacagacaagtatgagaatcttgtggaggctggagtcatt
gatccagcaaaggtgactagatgtgctttgcagaattctgcatctgtagctggaatggtc
ctgaccacccaggccattgttgtagaaaagcccaagcctaagacacccgttggtgcccct
cctcaaggtcttaccgtgtaa
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