Populus alba (white poplar): 118034751
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Entry
118034751 CDS
T07314
Name
(RefSeq) high mobility group B protein 6
KO
K09273
upstream-binding transcription factor
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palz03000
]
118034751
03021 Transcription machinery [BR:
palz03021
]
118034751
Transcription factors [BR:
palz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
118034751
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
118034751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Motif
Other DBs
NCBI-GeneID:
118034751
NCBI-ProteinID:
XP_034896026
LinkDB
All DBs
Position
3:16519987..16522551
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AA seq
505 aa
AA seq
DB search
MADTAVASTVPKKSRNNRKALKQKNPSTNESNIMAQKLSETSTATVLSPSDTDPSKENHA
SHSQPRSSPKKGKSKAAKAKQNKEASASLFEKDFQEMQEMLQQLKLEKEKTEVLLKEKDD
MLKAKDEEIEMKGKEQQKMKMELKKLQKLKEFKPTMTLPFVQVMNDKEQDKKKKKGGNEI
KRPCPPYSLWCKAQWNEVKKENPDAEFKDISNILGAKWKTITAEEKKPYEEKYQAEKEAY
LKVMTKEKRESEAMKLLEEEQKQKTAMELLEQYLQFKQEADQEENSKKTKKEKDPLKPKQ
PLSAFFLFCNERRAALLAENKSVLEVAKIAGEEWKHMTEKQRGPYEEVAKKNREKHMQEM
EAYKQTKDEEAMNLKKEEEELVKVQKQEALQLLKKKEKTENIIKKTKEQRQKKQQQNVDP
NKPKKPASSFLLFSKETRKSLMDGRPGISNSTLTAMISVKWKELNEEERQIWNSKAAEAM
EAYKKELEEYSKSLAAATSNDEQQQ
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcagatactgctgtagcctcgacagttccaaaaaaatcaagaaacaacaggaaagct
ttgaaacagaagaacccatcaacaaatgaatccaatataatggctcaaaagctctctgag
acatctactgccaccgttttatctccatcagatactgatccttcgaaagaaaaccatgcg
agtcattctcagcctcggtcttcacccaagaaagggaaatccaaggccgcgaaagcgaag
cagaataaagaggcttcggcttctttgtttgagaaagattttcaagaaatgcaagaaatg
ttgcagcagttaaagcttgagaaagagaagaccgaggttttgttgaaggagaaagatgac
atgttgaaggctaaagatgaggagattgaaatgaaaggtaaagaacagcagaagatgaag
atggagttgaagaagttgcagaagttgaaggaattcaagcccaccatgactctcccattt
gttcaagtaatgaatgacaaggagcaagacaagaagaaaaagaagggtggcaatgaaatc
aaaaggccatgcccaccttactcactttggtgcaaagctcaatggaatgaggtaaaaaaa
gaaaacccagatgcagagtttaaggatatctctaacattttgggggcaaagtggaagacc
attactgcagaggagaagaagccttatgaggagaagtatcaggctgaaaaggaagcctat
ctgaaagtaatgacaaaggagaagcgcgagagtgaagcaatgaagcttttggaagaggaa
cagaagcagaagactgctatggaattgcttgagcaatacctccagttcaagcaggaagca
gatcaggaagagaacagcaagaagaccaagaaagaaaaggatccattgaaaccaaagcag
ccattgtctgcatttttcctgttctgtaatgagagaagagccgctctccttgcagagaac
aagagtgttctggaggtggcaaagattgctggtgaagaatggaagcacatgacagaaaaa
caaagggggccttatgaagaggttgcaaagaagaacagggaaaagcatatgcaagaaatg
gaggcttacaagcagacaaaggatgaagaagctatgaatctcaagaaagaagaggaagaa
ctggtgaaagttcagaaacaggaagcattgcagttgcttaagaagaaagagaaaactgaa
aacattatcaagaaaaccaaagagcaacgccagaagaagcagcagcagaatgttgaccct
aacaagcctaagaagcctgcatcttcattccttcttttcagcaaagaaaccaggaaaagt
ttaatggacgggcgccctggaatcagtaattccaccctgactgcaatgatttctgtgaag
tggaaggaacttaatgaagaagagaggcaaatctggaactccaaagcagctgaagccatg
gaagcatataagaaggaactggaggagtacagcaaatctttagcagctgcaacttcaaat
gacgaacaacagcagtag
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