Populus alba (white poplar): 118035171
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Entry
118035171 CDS
T07314
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
palz
Populus alba (white poplar)
Pathway
palz03013
Nucleocytoplasmic transport
palz03015
mRNA surveillance pathway
palz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118035171
09122 Translation
03013 Nucleocytoplasmic transport
118035171
03015 mRNA surveillance pathway
118035171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118035171
03041 Spliceosome [BR:
palz03041
]
118035171
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
118035171
Spliceosome [BR:
palz03041
]
Common components
Common spliceosomal components
Cap binding complex
118035171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G
MIF4G_like_2
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
118035171
NCBI-ProteinID:
XP_034896577
LinkDB
All DBs
Position
9:5273259..5286562
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AA seq
868 aa
AA seq
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MSSWKSLLLRIGDNCPDYGTSSDFKEHIETCFGVIRRELEHSSNDILTFLLQCAEQLPHK
IPLYGTLVGLLNLENEDFVKQMVETTQANFQDALDFGNCDMIRILMRFLTVMMCSKVLQP
SSLVVVFETLLSSAATTLDEEKGNPSWQARGDFYVSCILSCLPWGGSELVEQVPEEIESV
MVGIEAYLSIRRHNSDTGLSFFEDDDESGRGVVEKDFLEDLWGRIQVLSSNGWKVDSVPR
PHLSFEAQLVAGKSHEFGPINTPEQPEPLSEVSGVLYGKQKHDAELKYPQRIRRLNIFPA
SKIEDMQPIDRFIVEEYLLDVLLFLNGCRKECASFMVGLPVPFRYDYLMAETIFSQLLLL
PLPPFKPIYYTLVIMDLCKALPGAFPGVVAGAVRALFEKIADLDTECQTRLILWFSHHLS
NFQFIWPWEEWAFVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELLPPK
GSPNFIYSIEDGREKTEQHALSAELNNKVKGRQTAREIISWVEESVFPNHAWDVALKVVV
HTLLDIGSKSFTHLITVLERYGQVFARICPDHDKQVMLIAEVSSYWKNNAQMTAIAIDRM
MGYRLISNLAIVRWVFSPANIEQFHTSDRPWEVLRNAISKTYNRISDLRNEISSLKKSVV
SAEEAATKAKTELDAAESKLSLVDGEPVLGDNPARLKRLKANAEKAKEEEVSVLESLEAK
EALLARALDENEALFLSLYKNFSNVLMERLPDPSRARTLRELKSIQADEMTVDLDESSVM
EVDNESGRPNKSQSNGGKESNIYNVGEKEQWCLSTLGYVKAFARQYASEIWAHIEKLDAD
VFTENVHPLFKKAVYSGLSRPINDVSSG
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctggaaaagtctccttcttcgaatcggcgacaactgccccgactatggcacc
agctccgacttcaaagaacacattgaaacttgcttcggtgttattcggcgagagttggag
cactcttctaacgatattttaactttccttctccagtgtgctgaacagttgcctcacaag
attcctttatatggaactttggttggcctattgaacttggagaatgaggacttcgtgaag
caaatggtggagacaactcaagctaattttcaggatgccctagattttggaaactgtgac
atgattcgcattttgatgcgctttcttactgttatgatgtgcagtaaagttctccaacct
tcttctctggtagttgtctttgaaacactcttatcatctgctgccacaacattggatgaa
gagaaaggaaatccttcctggcaagcccgtggggacttttatgtaagctgcattttatcc
tgtcttccatggggaggatcagagctcgttgagcaagttcctgaggagattgagagcgtc
atggttggtatagaagcttatttgagcattagaaggcataattctgataccggattgtct
ttttttgaggatgatgatgaatctgggaggggtgttgttgagaaggatttcttggaagat
ttatggggtcggattcaagtactatctagcaatggatggaaagtagacagtgtacccaga
cctcatctctcgtttgaagctcagctggttgctgggaagtctcatgagttcgggcccatc
aacactcctgagcaacccgagccactttcagaagtctctggggtactttatggtaaacag
aagcatgatgcagagttaaagtatcctcaaaggatacgcaggcttaatatatttcctgcg
agtaaaattgaggatatgcaacccatagatcgcttcattgtggaagagtacttgctggat
gtacttttgttcctcaatggatgtcgaaaggaatgtgcttcgttcatggttggcctgcct
gtaccatttcgttacgactatctcatggcagagactattttctctcagttacttttgcta
ccattaccacctttcaagccaatatattacacacttgtgataatggacctttgtaaggct
cttcctggagccttccctggagttgtagctggtgcagttcgtgcactttttgagaaaata
gctgatttagatacggagtgtcagacaaggctcatcctttggttttcacaccatctgtca
aactttcaattcatctggccatgggaagagtgggcttttgttttagacctacctaagtgg
gccccacagcgtgtgtttgttcaagaggtcttggaaagagaagtccgtctgtcatactgg
gacaaagttaagcagagcattgagaatgcacctgctttagaagagttgcttccaccaaag
ggtagtccaaacttcatatacagcatcgaagatggtagagaaaaaactgagcagcatgct
ctgtctgcagagctcaacaacaaggtgaagggaaggcaaactgctcgagaaataatctca
tgggtagaagaaagtgtatttcctaatcatgcttgggacgtcgcccttaaagtggttgta
catacccttcttgatatcggttctaaaagtttcactcatttgatcactgttttggagaga
tatggccaagtatttgcacgaatttgtcctgatcatgataagcaggtcatgctgatagct
gaagttagttcatattggaagaacaatgctcaaatgactgccatagcaattgacagaatg
atgggttatcgactaatttctaatttggcaattgtgagatgggtattttctcccgcaaac
attgagcaatttcatacatctgatcgtccatgggaggttcttagaaatgctatcagcaag
acttataaccgtatatctgatctaagaaacgagatatcatctcttaagaagagtgttgta
tcagctgaagaagcagcgacaaaggcaaaaacagagttagatgctgctgagtcaaagctc
tctcttgtggatggtgagcctgttcttggtgataaccctgcaaggttgaagcgcttgaaa
gcaaatgctgaaaaggcaaaagaagaagaggtgtctgtgcttgagtctttggaggccaag
gaggctcttcttgctcgcgcccttgatgaaaatgaggcattgttcctctctttgtacaaa
aacttctcaaatgtgttgatggaacgtctacctgatccatctagagctcgaacattgcgg
gaattaaagtcaattcaagcagatgaaatgaccgttgatctcgatgaatcatcagtaatg
gaagtggataatgagagcgggagacccaacaaaagtcagtcgaatggaggaaaggaaagc
aacatctataatgtgggagagaaagagcaatggtgtttatcaactctcggctatgtcaag
gcctttgcaaggcagtatgcttctgagatatgggctcacatcgagaagctagatgcagat
gtattcacagaaaatgtgcatcctcttttcaagaaagcagtttattctggtttaagtcgg
ccaatcaatgatgtgtcatctggctaa
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