Populus alba (white poplar): 118035179
Help
Entry
118035179 CDS
T07314
Name
(RefSeq) protein CHROMATIN REMODELING 5-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118035179
03036 Chromosome and associated proteins [BR:
palz03036
]
118035179
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
118035179
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
118035179
SLIK complex
118035179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
SWI2_SNF2
OAM_alpha
KH_PARP14_5
Motif
Other DBs
NCBI-GeneID:
118035179
NCBI-ProteinID:
XP_034896582
LinkDB
All DBs
Position
9:complement(5202348..5219102)
Genome browser
AA seq
1759 aa
AA seq
DB search
MAFCRNYTTEAVSQSVLEGKGQGQATGRMLGNEDVDVNSSERELDRNMDVQYESEPDAAG
RLQSDLAAENCAGVSNSELQPSGRRNVAGKWGSSFWKDCQPMATPGASDSRQDSKSEDRN
AEGSEDNVSNGRDGRLESEDEEGQKEVGRGGKGHSDVPADEMLSDEYYEQDGEDQSDLMR
CRGFSQPVDLSSRLQSKPVPIKNNVSRRRSRGLHNSEGYDDDNNDGDGDNEEEDEDAEDD
PDDADFDPDYGALSGHMGGKDKDGESEDSDEEVNSDDWVISDDEDDDDSYYTKKPKGRQQ
GKGGCNTKSAREHTSLRASGRQKRGKTLFEEDEYSAEDSDSDKDFKNMTQRGDHLRKSNA
RSTMSTNIGGRNNEVRTSSRSVRKVSYVESDESEETGEGKKKNAQKDEVEEEDGDSIERV
LWHQPRGTAEDAMRNNRSTEPVLLSYLFDSVPDWKEMEFLIKWKGQSHMHCQWKPFSDLQ
NLSGFKKVLNYTKKVMEDVRYRRSFTREEIEVNDVSKEMDLDLIKQNSQVERIIADRITK
DSSGNVVPEYFVKWRGLSYAEATWEKDVDIAFAQDAIDEYKTREAAIAVQGKMVDLQRKK
GKASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLG
FLQNAQQISGPFLVVVPLSTLSNWAKEFRKWLPDMNVIVYVGTRASREVCQQYEFYNDKR
VGQPIKFSALLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLLEFSTKNKL
LITGTPLQNSVEELWALLHFLDPDKFRSKDDFVHNYKNLSSFNENELANLHMELRPHILR
RVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELK
KCCNHPFLFESADHGYGGDISTNDSSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQ
MVRMLDIIAQYMSLRGFQFQRLDGSTKAELRQQAMEHFNAPGSDDFCFLLSTRAGGLGIN
LATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVL
DHLVIQKLNAEGRLEKKETKKGSYFDKNELSSILRFGAEELFKEDRNDEESKKRLLSMDI
DEILERAEKVEEKEVGGEQGNELLGAFKVANFCCAEDDGSFWSRWIKPDAVAEAEDALAP
RAARNTKSYAEDNQPGRSNKRKKKGSEPPEPQERVHKRRKADYSAPLAPMIEGASFQVRE
WSHGNLPKRDALRFSRVVIKFGNLNQIDLIAEEVGGTVAAAPPDAQIELFDALVDGCREA
VEVGNLDPKGPLLDFFGVPVKANDLLSRVQELQLLAKRISRYENPIAQFRVLMYLKPSNW
SKGCGWNQIDDARLLLGIHYHGFGNWEKIRLDERLGLSKKIAPAELQHHETFLPRAPNLK
DRANALLEMELAAIGGKKANAKGGRKASKKGRENLLNISVLRDRGKKMKPGSVMVSVQTS
KNRPQRPQRVEQLVKEEGEMSDNEELCEQFKEVKWMEWCEEVMFHEIKTLKRLNKLQTTS
ADLPKEKVLLKIRNYLQLIGRRIDQIVLEYEEERYKQDRMTMRLWNYVSTFSNLSGEKLR
QIYSKLKQEQEEDASAGPSHANGAAYGSLDKDSNPNNFPPLSRNFERQIGYKNESAYAMS
EPINRGHGSGKFVAWKRRRRAEADIQPQFQSPLQRPSGTRLSNPNSLGILGAGPPDNRPF
FERPHRVRQTGFTPKQNLT
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atggctttttgcaggaactatacaactgaagcagtatcacagagtgtcctagaaggaaaa
gggcaaggtcaggctacaggtagaatgttaggcaatgaggatgtagatgtgaattccagt
gaaagagaactggataggaacatggatgtgcaatatgaaagcgaaccagatgctgcaggt
aggttgcagagtgatttagctgctgaaaattgtgctggtgtgagtaattcagagttgcaa
ccttctggaaggagaaatgtggctggaaaatggggttccagtttttggaaggactgtcaa
cccatggctactcctggggcatcagattccaggcaggattccaagtcagaggatagaaat
gcagaagggtcagaagataatgtatcaaatggaagggatggtagattagaatcagaagat
gaagagggacaaaaagaagtaggtaggggtgggaaaggccattctgatgtccctgcagat
gagatgttgtctgatgaatactatgagcaggacggggaggatcaaagtgacttgatgcgt
tgtagggggtttagccaacccgttgatttgagctccaggttgcaatcaaagcctgtacca
atcaagaataatgtgtccaggaggaggtctagaggtttgcacaatagtgaaggttatgat
gatgacaataatgatggtgatggtgataatgaggaagaagacgaagatgcagaagatgat
cctgatgatgcagattttgaccctgattatggcgccttgagtggtcacatggggggcaag
gataaagatggggagagtgaagattcagatgaagaagttaacagtgatgattgggttatc
tcagatgatgaagatgatgatgattcgtattacacaaaaaaacctaagggcaggcaacag
ggtaaaggtgggtgtaatacaaaatctgccagagagcacacatcattacgtgcttccggt
cgacaaaagagagggaaaacattgtttgaagaggatgagtattcggcagaggattctgac
agcgacaaagatttcaagaacatgactcaaagaggtgatcatctccgcaaatctaatgct
cggtccactatgtcaacaaacattggtggaagaaacaatgaggttcgcacttctagtagg
tcagttcgtaaggtgtcatatgttgaaagcgatgaaagcgaagagactggtgaagggaaa
aagaagaatgcccaaaaggatgaagttgaagaagaagatggtgactccattgaaagggta
ctgtggcatcagccaaggggcacagctgaagatgcaatgaggaacaatagatcaacggag
cctgttctgttaagctacctgtttgattctgtgcctgattggaaagaaatggagttcttg
ataaagtggaaaggccagtcacatatgcactgccaatggaaaccattttctgacttacaa
aatctaagtggatttaagaaggtactgaactacactaaaaaagtgatggaagatgtgagg
tacaggagatcatttacacgcgaggagattgaggtcaatgacgtgagcaaggaaatggat
ttggatctaattaagcaaaatagtcaggtggagagaattattgctgatcgaattactaaa
gatagctctggtaatgtcgtgccggagtattttgtcaagtggcgaggactatcttatgct
gaagcaacctgggaaaaggatgtagatattgcttttgcacaagatgctattgacgagtac
aagacacgtgaggctgcaattgctgtacaggggaaaatggtggatctacagcgcaagaaa
ggaaaagcaagtttaaggaaacttgatgaacagcctgaatggttgagaggaggaaagctt
cgtgattaccagcttgagggtttgaattttctagttaacagttggagaaatgatacaaat
gtcattttagctgatgagatgggtctcggaaaaacagttcagtcagtttccatgcttggt
tttcttcagaatgctcagcagatctccggaccatttcttgttgttgtacccttatcaact
ttgtctaactgggctaaagaatttagaaagtggcttcctgatatgaatgttattgtatat
gttggtactcgtgctagtcgagaggtttgtcagcaatacgaattttacaatgataagaga
gttggccagcctataaaattcagtgctctgttgaccacatatgaagttgttctgaaggac
aaggctgttctgtccaagattaagtggaattatttaatggttgatgaagctcataggtta
aagaacagtgaagcgcagttgtacacaactcttttggaatttagcaccaagaacaaattg
ctaattacaggcactccattgcagaacagtgtagaagagctatgggctctgcttcatttt
cttgatcctgacaagttcaggagtaaggatgattttgttcacaattataagaatcttagc
tcttttaatgaaaatgagctcgctaatcttcacatggaattgaggcctcacattctcaga
agagttatcaaggatgtggagaaatccttgcctcccaaaatagagcgcattctgagggtt
gaaatgtctcctctccagaaacaatactataaatggattttggaacgtaacttccatgac
ctgaacaaaggagttcgtggcaatcaggtttcacttctgaatattgtggtagagttgaag
aaatgctgcaaccaccccttcctatttgaaagtgcggatcatggttatggtggggacatc
agtaccaatgatagcagtaaactggagaggattatcttaagcagtggaaagctggttatt
cttgacaagctacttgtcagattacacgagacaaaacatcgtgtccttattttctcccag
atggtcagaatgttggatataatagctcaatacatgtcactcagagggttccaatttcaa
aggcttgatggtagcacaaaggctgagttgcgtcagcaggcaatggaacatttcaatgca
cctggtagtgatgatttctgcttccttctttcaactcgggctggcggcttaggcatcaat
cttgcaactgctgacacggttataatatttgattcagactggaatcctcaaaatgaccta
caggcaatgagcagagctcatagaattgggcagcaagaagttgttaacatctatagattt
gtgacaagcaaaagcgttgaggaagatatcctagagagagctaagaagaagatggttctc
gaccatttggtgatccaaaaactaaatgcagagggtagattggaaaagaaagaaacaaaa
aaagggagttattttgataaaaatgagctctcatcaattttaagattcggggctgaggaa
ctctttaaagaggacagaaacgatgaagaaagcaagaaaagactcttaagtatggatatt
gatgaaattcttgaaagagcagagaaagtggaggagaaggaagttgggggagagcaaggg
aatgaattgttaggtgcttttaaggttgcaaatttttgttgtgccgaagatgatgggagt
ttctggagtcgttggataaaaccagatgctgtagctgaagctgaggatgctttagctcct
cgtgctgcaagaaatactaagagttatgcagaggataatcaacctgggagaagtaacaaa
cggaaaaagaaaggttctgagccaccagaaccacaggagagagtgcacaagcgtcgaaaa
gcagattattctgcccccttagcaccaatgatcgagggagcatccttccaagtgagagaa
tggtctcatggaaatctgcctaagagagatgctttacgcttttctcgtgtggtgattaag
tttgggaacttgaaccaaatagacttgatagctgaggaggttggtggaacagttgcggca
gctccacctgatgcacagatagagctttttgatgctttggttgatggttgtagagaagca
gttgaagttggaaatctggacccaaagggtcctttgttggatttttttggtgtccctgtg
aaggcaaatgatctattgagccgtgtgcaagaacttcagctactagcaaagcgaattagt
cgttatgaaaatcccatagcacagtttcgagtgttgatgtacctgaagccttcaaactgg
tccaagggttgtggctggaatcagattgatgatgcgagattgcttctgggaatacactac
catggatttggcaattgggagaagatacggttagatgaaaggcttggcctttcgaagaag
attgctccagcagaactccagcatcatgagacctttttaccacgtgctccaaatttgaag
gatcgtgctaatgcacttctggagatggaacttgcagctattggtggaaagaaagcaaat
gctaaaggaggtcggaaggcctccaagaaggggagagagaatcttctgaacatctctgtt
ttgcgggacaggggcaagaaaatgaagcctgggtctgtaatggttagtgtacaaacgagc
aagaataggcctcagagaccacagagagttgaacagttagtaaaagaggagggtgagatg
tcagacaatgaggaattatgtgagcagtttaaggaagtaaaatggatggaatggtgtgaa
gaagtcatgtttcatgaaattaaaaccctgaaacgtcttaacaagttgcagactaccagc
gctgacctaccaaaggaaaaggtgcttttgaaaattcggaactatttacagcttattgga
cggagaatagaccagattgtcttagaatacgaggaagagcgttataaacaggataggatg
acaatgcgattatggaattatgtttctactttttcaaatttatctggcgagaaacttcgt
cagatttattcaaaacttaaacaggagcaggaggaagatgcaagtgctggaccctctcat
gccaatggtgctgcatatggttctcttgacaaagacagcaatcccaacaatttccctccc
ctttctagaaattttgagcggcaaattggatataaaaatgaaagtgcctatgcaatgtca
gaaccaataaacagaggtcatggttctgggaaatttgtagcgtggaaacgacgcagaaga
gctgaagctgatattcaaccccaatttcaatcccccttacaaagaccatcgggcacccgg
ttatccaaccctaactcattggggattcttggggcaggaccacctgataataggcctttt
tttgagagacctcaccgagtgcggcaaactggttttactccaaaacaaaatttgacgtaa
DBGET
integrated database retrieval system
