Populus alba (white poplar): 118035346
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Entry
118035346 CDS
T07314
Name
(RefSeq) probable pectate lyase 22
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118035346
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118035346
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
118035346
NCBI-ProteinID:
XP_034896763
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Position
11:complement(12175060..12176190)
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AA seq
247 aa
AA seq
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NRSSTRRQLGNDACRTGNPIDDCWRCDPDWETNRKVLADCVIGFGRNAVGGRDGNLYVVT
NSENDDPVNPIPGMLRYGVIQEEPLWIIFDQDMVINLKEELIMNSHKTIDGRGHNIQIAD
GPCITIQNVSNIIIHNIYIHGCVPGGNAIVRDSTKHYGLRGISDGDGISIFAARDVWIDH
CTLAACHDGLIDAVSGSTSITISNNYMFNHNEVMLMGHSDDFLDDKNMQVTIAFNFFGEN
LVQRMPR
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
aacaggagctcaacgagaaggcagctgggaaatgatgcatgcagaaccggtaaccctatt
gatgattgttggagatgcgaccctgattgggaaaccaacaggaaggtgctagctgattgc
gtgattgggttcggacgcaatgctgtggggggacgagatggtaacctctatgtagtaaca
aattctgagaatgatgaccctgtaaacccaattccaggcatgctccgctatggtgtcatc
caggaagagcctctgtggatcatctttgatcaggacatggtcatcaacttgaaggaagaa
cttattatgaattcacacaaaacaattgatggccgggggcataacatccagattgcggat
ggtccttgcataaccattcaaaatgtcagtaacattatcatacataacatctacatacat
ggctgtgtaccaggaggaaacgccattgtaagagactccacaaagcattacggtttgaga
ggtatttcggatggggatgggatatcgatatttgcggctagggatgtgtggattgatcat
tgtacactagctgcttgccatgacggactgatagatgctgtatctggctcaacatctata
acaatctcaaacaactacatgttcaatcataatgaggttatgcttatgggtcatagtgat
gattttcttgatgacaagaacatgcaagtcacaattgccttcaatttttttggtgaaaat
ctggttcaaagaatgcctaggtaa
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