Populus alba (white poplar): 118035459
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Entry
118035459 CDS
T07314
Name
(RefSeq) uncharacterized protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palz03016
]
118035459
Enzymes [BR:
palz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
118035459
Transfer RNA biogenesis [BR:
palz03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
118035459
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
DUF6447
DUF6249
Motif
Other DBs
NCBI-GeneID:
118035459
NCBI-ProteinID:
XP_034896924
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Position
13:complement(11997545..12003257)
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AA seq
625 aa
AA seq
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MEDIEDLLIGNGSGSPPGFRLPLNAVGVNLKKNKNKPKLHAKQLSETPISSKIPGTQTIY
IKTFGCSHNQSDSEYMAGQLSSFGYSLSDSPEEADLWLINTCTVKSPSQSAMDTLISKGK
SAKKPLVVAGCVPQGSRNVKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPAL
DLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLAGRVKTVIDDGVKEIW
LSSEDTGAYGRDIGVNLPILLNAIVAELPSDGSTMLRIGMTNPPFILEHLKEIAEVLRHP
CVYSFLHVPVQSGSDAILTAMNREYTVNEFRTVVDTLTELVPGMQIATDIICGFPGETDK
DFSQTVNLIKAYKFAQVHISQFYPRPGTPAARMKKVPSNIVKQRSRELTSVFEAFTPYNG
MEGRVERIWITDIATDGIHLVGHTKAYVQVLIVAQESMLGTSAIVKITSVGRWSVFGEVI
ETLNQINQKSKSVEKILSEEKCSPCSDPCDSCACSGESEPCACGPESCGGQSTLEQSDVL
QNEVLQEDQNRRNLIGWLLRKRKNQAQKMVENGIASGSQKKQEWAKRAPEEWGVVDRALL
GGLIVSVFTTVALLIHLGFKTMSSK
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggaagacattgaagacttgctgattggtaatggaagtgggtctcctcctggattcagg
ttgccactgaacgcagttggagtaaacctcaagaagaacaagaataagccgaaactgcat
gccaagcaactttctgaaacccctatctcttccaagattcctggcactcagacaatatat
atcaagacttttggatgctcccataatcagagtgatagtgaatatatggccggacaactt
tcatcatttggttattcattaagtgatagtcctgaggaggcagacctgtggctgatcaat
acatgcactgtaaaatcaccaagtcaatcagccatggacactctaatatcaaagggtaaa
agtgcaaaaaaaccacttgtggtggctgggtgtgtgcctcaaggaagtcggaatgtgaaa
gaattagaaggagtcagtatagttggagtccagcaaatagatcgtgtagttgaagttgta
gaggagactttaaaaggtcatgaagtgcggcttctgaaccgcaagacattgccagcactt
gacctccccaaggtgcgaaagaacaaatttgttgagattcttcccattaatgttgggtgt
ttgggggcctgtacttattgcaagacaaagcatgcccgtgggcatttagggagctacact
gtcgatagccttgcagggcgtgtaaaaacagttatagatgatggagtaaaggaaatatgg
ttgagtagtgaagatacaggagcttatggtcgcgacattggggttaatcttccaatttta
ttgaatgctattgttgctgaacttccttctgatggaagcacaatgcttcgaattgggatg
acaaatccaccttttattctggagcacctgaaagagatagcagaagttctgcgccatcca
tgtgtatactcctttcttcacgtgccagtgcagtctggtagtgatgctattttgactgca
atgaatcgagaatacactgtgaatgaattcaggactgtggttgataccttaactgagcta
gttccagggatgcagattgctaccgatataatatgtggattccctggtgaaacagataaa
gatttttctcaaactgtcaaccttattaaagcgtacaagtttgctcaagttcatatctcg
cagttctatcctagaccagggacacctgctgcaaggatgaagaaggttccaagtaacata
gtgaagcaaagaagccgtgaattgacttctgtgtttgaagctttcactccttacaatgga
atggagggcagagtggaaagaatatggataacagatatcgccactgatggaattcacttg
gttggccacacaaaggcatacgtgcaggtgctcatagttgctcaagaaagcatgctgggt
acttcagctattgttaagataacctccgttggaaggtggtcagtttttggagaagtgatt
gagactctcaaccaaataaatcagaaatcgaagtctgtcgagaaaattctcagtgaggaa
aaatgttctccctgttccgacccgtgtgacagctgtgcatgttccggagagtcagaacct
tgtgcttgtggaccagagagctgtggaggacagagtactttagaacaaagtgatgttttg
cagaatgaagtgcttcaagaagatcaaaatagaagaaatctcattggatggttactaaga
aagcggaaaaaccaggcacagaaaatggtggagaatggtattgcgtcgggatcccagaaa
aagcaagaatgggccaaacgagctccggaggagtggggtgttgtggatagggcactccta
ggaggattaattgtcagcgtttttactactgtagctttgctaatacatcttggatttaag
accatgtcatccaagtga
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