Populus alba (white poplar): 118035841
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Entry
118035841 CDS
T07314
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1 isoform X1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118035841
Membrane trafficking [BR:
palz04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118035841
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
118035841
NCBI-ProteinID:
XP_034897381
LinkDB
All DBs
Position
11:complement(1185990..1212395)
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AA seq
1852 aa
AA seq
DB search
MDNNNSNGSSGGQRFRKIPRHSQPLSHLKLDPLVDENLEQWPHLNELVQCYRTDWVKDEN
KYGHYESISPVSFQNQIFEGPDTDLETELHLANSRRNKAEETTDDDIPSTSGRQFVEAAF
PDSSNSVVSKHFGESPLPAYEPAFDWDNERSMIFGQRIPETPLPQYDSGLKISVKVLSLS
FQAGLAEPFYGTICIYNKERREKLSEDFYFSVVPTDTQDAKISHDPRGIFYLDAPSSSIC
LLIQLEKPATEEGGVTASVYSRKEPVHLSEREKQKLQVWSRIMPYKESFAWTIVPLFDNS
IAATSGGAASPSSPLAPSVSGSSSHDGVFEPVAKITLDGKLGYSSGSSVVVEISNLNKVK
ESYTEDSLQDPKRKVHKPVKGVLRLEIEKHQTAHAELENLSETGSITNDSIDLGDRVADS
AFTKSPSNGFDDPQSSGSKWNIFDGKETSGNISNARENPDFTADDFQAFDFRTTTRNEPF
LQLFHCLYVYPLTVSLSRKRNLFIRVELRKDDVDVRRQPLEAMHPREPGTSLQKWAHTQV
AAGTRVACYHDEIKLSLPAIWTPSHHLLFTFFHVDLQTKLEAPKPVVIGYAVLPLSTHAQ
LRSEISLPIMRELVPHYLQEMGKERLDYLEDGKNVFRLRLRLCSSLYPINERIRDFFIEY
DRHTLRTSPPWGSELLEAINSLKNVDSTALLQFLHPILNMLLHLIGSGGETLQVAAFRAM
VNILTRVQQESVDDTERNRFLVNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRV
GPVYDDVLAMAWFFLELIVKSMALEQARLFYHSLPLGEDVPPMQLKEGVFRCIMQLYDCL
LTEVHERCKKGLSLAKRLNSSLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDC
KLTFLQIICDHDLFVEMPGRDPSDRNYLASVLIQELFLTWDHDELSQRSKAARILVVLLC
KHEFDARYQKPEDKLYIAQLYFPLVGQILDEMPVFYNLNAVEKREVLIVILQIMRNLDDT
SLVKAWQQSIARTRLFFKLMEECLVLFEHRKPADGILMGSSSRSPVGDGPASPKYSDRLS
PAINNYLSEASRQEVRPQGTPDNGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQ
ALRESLHPILRQKLELWEENLSAAVSLQVLEITEKFSMMAASHSIATDYGKLDCLTAIFT
SFFSRNQPLSFWKALFPVFNNVFDLHGATLMARENDRFLKQVAFHLLRLAVFRNESVKKR
AVIGLQILVRSAFYYFMQTARLRVMLTITLSELMSDVQVTQMKSDGMLEESGEAKRLRKS
LEEVADELKTPDLLRECGLPESALVAVPKKLAENRWSWSEVKYLSDCLILALDASLEHAL
LGSVMTVDRYAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGV
VMQALVARNDGVWSKDHVISLRKICPMVSSEITSEASAAEVEGYGSSKLTVDSAVKYLQL
ANNLFSQAELFHFCANILELVIPVYKSRRAYGQLAKCHTSLTNIYESILEQESSPIPFTD
ATYYRVGFYGERFGKLDRKEYVYREPRDVRLGDIMEKLSHIYESRMDDNHTLHIIPDSRQ
VKADELQPGVCYLQITAVDPVMEDEDLGSRRERIFSLSTGTVRARVFDRFLFDTPFTKNG
KTQGGLEDQWKRRTVLQTEGSFPALVNRLLVMKSESLEFSPVENAIGMIETRTAALRNEL
EEPRSSEGDQLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAA
LLEFMAVCKRAIRVHFRLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILAEL
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atggataataataatagtaacggcagcagcggagggcagcggttccggaaaatacctcgg
cattctcagcccctttctcatctcaagttggacccgttggtagatgaaaatttggagcag
tggccacatcttaatgaacttgttcaatgttatagaactgattgggtgaaggatgaaaac
aagtatggtcattatgaaagtatctctccagtatcttttcaaaaccagatttttgaaggt
ccggatactgatctcgagacagaactgcatcttgccaattcaagacgaaacaaggctgaa
gagaccaccgatgatgacatcccaagtacttcaggaaggcaatttgtggaggccgccttc
cctgactcatcaaattctgttgtttcaaagcattttggtgaatctcctctccctgcatat
gaaccagcttttgattgggataatgagaggtcgatgatatttggccaaaggattcctgaa
actccattgccacagtatgacagtggattgaagatctctgtgaaagtactgtccctatca
tttcaagcaggattagctgagccattttatggtacaatttgcatatataataaggagaga
agagaaaagttgtccgaggatttttatttttctgtggtgccaacagacactcaagatgca
aaaatttctcatgatccccgtggaattttctatttagatgctccttcatcatcaatatgt
ttgctcatccaactagagaagcctgccacagaagaaggcggggtcactgcctctgtttat
tcacgtaaagaacctgtgcacttgagcgagagagagaagcagaaactgcaggtctggtct
cgtattatgccttacaaagaatcctttgcgtggactattgttccattatttgataacagt
atagctgcgacttccgggggggctgcttctccaagcagccctcttgctccaagtgtatct
ggctcaagctcccatgatggtgttttcgagcctgttgcaaagatcactctggatgggaag
ttgggttattcaagtggaagctctgttgtggttgaaatatcaaatttaaataaagtcaag
gaaagctacactgaggactcacttcaggatcctaaacgcaaagttcataaacctgtcaag
ggtgttctcagactagaaattgaaaagcatcagacagcccatgcggagttggaaaattta
tcagaaactggcagtataaccaatgattccattgatctgggggatcgtgttgctgattct
gcatttacaaaatcccctagcaatggcttcgatgatcctcaaagtagtggttcgaagtgg
aatatctttgatgggaaagaaacatctggaaatatatcaaatgctcgtgaaaatcctgat
ttcactgctgatgatttccaagcttttgatttccgcacgaccacgaggaacgagcctttc
ttgcagcttttccattgcctgtatgtttacccattaactgtcagtttgagtcggaagagg
aatttgttcattcgggttgaactaaggaaggatgacgtggatgttcgtagacagccttta
gaggcaatgcatcccagggagccaggaacatcactccaaaagtgggctcacacacaagta
gctgctgggactagagtggcttgctatcacgatgaaatcaaactttctctgccagccatt
tggacaccatcccatcacctcttgttcactttcttccatgttgatcttcaaaccaaactg
gaagctccaaaaccagtggttatcggatatgcagtgcttccattatccacacatgcgcag
ttgagatctgaaatttctttgccaataatgagagagctggttccacattatctccaggaa
atgggaaaggagaggctggattatttggaagatggaaaaaatgtcttcagattgcgcttg
agactatgctcatctctgtatcccattaatgagcgcattagagatttttttattgaatat
gataggcacactcttcgtactagtccaccttggggatctgaacttcttgaggccattaat
agtctgaagaacgttgattccactgctttgcttcagtttctccacccaattttgaatatg
cttctccatcttattggcagtggtggagaaactcttcaggttgcagccttcagggccatg
gttaatatcctaactagggtgcagcaagagtcagttgatgatactgaacggaatcgtttt
ctggttaactatgttgattatgcttttgatgactttggtggtcgtcaaccacctgtttat
cctggtttgtccactgtgtgggggagtctggctcgtagcaaggctaaaggctatcgtgtt
ggaccagtatatgatgatgtattggcaatggcatggtttttccttgagcttattgtcaag
tcgatggcattggagcaagctcgtcttttctatcatagtcttccattgggtgaagatgtt
ccaccgatgcaattgaaagaaggtgtgttcagatgcataatgcagttatatgattgcctt
cttacagaggtgcatgagcgttgtaagaagggtttaagcttggcaaaacgtttgaatagc
agtttggccttcttctgctatgatcttttgtcaatcattgaacctcgtcaagtttttgaa
ttggtgtccttgtatctggacaagttttctggggtatgccaatcagttcttcatgactgc
aagcttacctttttgcaaatcatatgtgatcatgatctttttgtggagatgccggggagg
gacccttcagatagaaactaccttgcgtcagttttaatacaagagcttttccttacttgg
gatcatgatgagctatctcaacggtcaaaggcagccagaatcttagtagtactgctttgc
aagcatgaatttgatgctcgataccaaaagcctgaagataaactatatatcgcgcagcta
tattttccacttgttggccagatcctggatgagatgcctgtcttctacaacctgaatgct
gttgaaaagcgtgaagttttaattgttattttgcaaatcatgcgcaatttggatgataca
tcgcttgtcaaggcgtggcagcaaagcattgctcggactagattatttttcaaactcatg
gaggaatgccttgttctttttgagcacagaaaacctgctgatggcattcttatgggatct
agttctcgcagtcctgttggggatggacctgcttctcccaagtactccgataggctctct
ccagcaatcaacaattatctgtctgaggcatcacggcaagaagtcaggcctcagggtaca
cctgataatggatatttgtggcagagagtgaattcccaattaagctcccccagccagcca
tattccttgagagaagcacttgctcaggcacaatcttccaggattggagcttcagcccaa
gcacttagagaatccttgcatccaatattgagacagaaactggagctttgggaagaaaac
ttgagtgctgctgtgagtcttcaggttctggaaataactgagaagttttctatgatggca
gcttcccatagcattgctactgattatgggaaacttgattgcctcacagccatatttacg
agcttcttctctcgaaatcaaccattgtctttctggaaagctctatttcctgtctttaac
aacgtgtttgatcttcatggggcaacattaatggccagggagaacgatcgtttcttaaag
caggttgctttccatcttcttcggcttgcagtttttagaaacgaaagtgtcaagaaaaga
gctgttattggcctccagattcttgtcaggagcgctttctattacttcatgcaaacagca
aggttgagggtcatgctgactatcacactgtcagagctgatgtctgatgtgcaagtgact
cagatgaagtctgatggaatgctagaggagagtggtgaagcaaaacgacttcgcaagtct
ttggaggaggtggcagatgaattgaagactcctgacctactacgggaatgtggacttcct
gaaagtgctctggtggcagttccaaaaaaattggcagagaataggtggtcttggagtgag
gtgaaatatctctcagactgccttatcctggcccttgatgctagccttgaacatgcactc
ttgggttctgtaatgactgtggatagatatgctgctgcagagagcttctataaactagca
atggcatttgctcctgttcctgatcttcacataatgtggttactgcatttatgcgatgca
catcaggaaatgcagtcttgggctgaagctgcacagtgtgctgtggctgttgctggtgtt
gtaatgcaggctcttgtggctaggaatgatggtgtgtggagcaaagatcatgtgatctct
ctacggaaaatttgcccaatggtcagcagtgagatcacttctgaggcatctgcagctgag
gtagaggggtatggttcttcaaagctcacagtggactctgctgtaaaatatctacagctt
gctaataaccttttctctcaagctgagctttttcatttctgtgcaaacattctggagctt
gtaataccagtttataaaagtaggagggcatatggacagctggctaaatgtcacacctcg
cttactaatatctatgaatcaattctggagcaggaatcaagcccaattccgttcactgat
gccacatactatagggtgggattctatggtgaaaggtttgggaaactagataggaaggaa
tatgtataccgagagccccgtgatgtacggctaggtgacataatggagaaacttagtcat
atttatgagtctaggatggacgacaatcacactttgcatattattccagattctaggcaa
gtaaaggctgacgagctgcagcctggagtctgctacctgcagataactgctgttgatccg
gtcatggaagatgaagatttaggaagcagaagggaaaggatcttctctctttccactggg
actgtccgggcacgtgtctttgaccgcttcttgtttgacactccatttacaaaaaatggt
aaaacccaaggtggattggaagaccaatggaagaggaggacagttcttcagactgaaggc
tcattccctgctctggtgaacaggcttttggtaatgaaatctgaatctcttgagttctca
ccagtcgagaatgcaattggaatgattgaaactcgaacagctgccttacgaaacgagctt
gaggagccccgcagctctgaaggcgatcagcttccacgtctccaaagtttgcagagaatt
ctccaaggcagtgttgcagttcaagtaaacagtggagttttgagtgtctgcacagccttc
ctgtcaggtgagcctgctacaaggttgcgttctcaagaactgcagcaactcattgctgcc
ttacttgaattcatggctgtttgcaagcgtgccattcgtgtacattttagattgattgga
gaggaagatcaagatttccacacgcagcttgtgaacggatttcaatcgctcactgcagag
ttatctcattacatcccagccattcttgcagaactatga
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