Populus alba (white poplar): 118036063
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Entry
118036063 CDS
T07314
Name
(RefSeq) deoxyribodipyrimidine photo-lyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palz03400
]
118036063
Enzymes [BR:
palz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
118036063
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
118036063
Prokaryotic type
118036063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
118036063
NCBI-ProteinID:
XP_034897655
LinkDB
All DBs
Position
1:10693738..10696953
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AA seq
497 aa
AA seq
DB search
MASLSSPPTQNTTVQPGRIRVIKEGSRGQVGGGPVVYWMFRDQRLQDNWALIHAVDQANR
SNVPVAVAFNLFDQFLGAKARQLGFMLRGLCQLQSHIEETLQIPFFLFLGEAEETIPAFL
KDSGASLLVTDFSPLRQFRTCQDEICKRVSDSVTIHEVDAHNIVPIWVASEKLEYSARTL
RGKINKLLPEYLIDFPMLQLPKNKWVAPTKQSIDWNDLIDNVLRKGAEVPEIKWCEPGED
AAMEVLMGSKDGFLTQRLKNYSTDRNNPLKPKGLSGLSPYLHFGQISAQRCALEARKVRN
LSPQSADAFLEELIVRRELADNFCFYQPNYDSIHGAWEWARKTLADHASDKREHIYSKEQ
LEKAQTADPLWNASQLEMVYHGKMHGFMRMYWAKKILEWTRGPEEALAISIYLNDKYEID
GRDPGGYVGCMWSICGIHDQGWKERPIFGKIRYMNYAGCKRKFNVDGYITYVKRIVGDIK
KRKAENELHKTMKELPS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcctctctatcatccccgccaacccaaaacaccaccgtccaaccgggacggatccgg
gtcatcaaagaaggatccagagggcaagtgggcggtggtcctgttgtttactggatgttt
agagatcaacggcttcaagacaactgggctttgatccatgccgttgatcaggctaacagg
agcaatgtgcctgtagctgtggcattcaatttgtttgatcagttcttgggggccaaagca
agacaattaggttttatgttaaggggtttgtgtcagcttcaaagtcacattgaagagaca
cttcagatcccatttttcttgttcctgggagaagctgaagagactataccagcattctta
aaagactctggggcttcacttttagttactgatttttcacctcttagacaatttcgtaca
tgccaagatgaaatttgtaagagagtaagtgattcagtgaccatacatgaagttgatgct
cataatattgtacctatttgggtggcgtcagagaagttggaatacagtgctaggacttta
aggggtaagataaataaattgctacctgagtacctcattgatttcccaatgttacaactt
ccgaagaacaagtgggttgcacctacaaagcagtcaattgattggaatgatctcattgac
aatgttttgaggaaaggggcagaagttcctgaaatcaaatggtgtgagccaggagaagat
gcagcaatggaagtgttaatgggaagtaaagatggattcttgacgcaaaggttgaagaat
tattctacggataggaataacccactaaaacctaaagggctctccggtctgtctccatat
cttcattttgggcagatttctgcacagcggtgtgccttggaggcacgtaaagtgaggaat
cttagtcctcagtcagccgatgcatttttggaggagttgattgtgcgtagagaacttgcg
gacaacttttgcttttaccagcccaattatgattccatacatggggcatgggagtgggca
cgtaagaccttggctgaccatgcttctgacaagcgagaacatatttactcgaaagagcaa
ttagagaaggcacagacagctgatcctctttggaatgcttctcagctggagatggtttac
cacgggaagatgcatggtttcatgcgtatgtattgggcaaaaaagattcttgagtggaca
agagggcctgaagaagcccttgcgatatccatatatctaaatgacaagtatgagatagat
gggagggatccaggtggatatgttggttgcatgtggtcaatatgtggcatccacgatcag
ggttggaaagagcgaccgatttttgggaaaatacgttatatgaactacgcaggctgcaag
cggaaatttaatgttgatggatacattacttatgtcaagagaattgtgggcgacattaag
aagagaaaagcggaaaatgagctccacaaaacgatgaaggaactccccagttaa
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