Populus alba (white poplar): 118036410
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Entry
118036410 CDS
T07314
Name
(RefSeq) TATA-box-binding protein 2 isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
palz
Populus alba (white poplar)
Pathway
palz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118036410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palz03000
]
118036410
03021 Transcription machinery [BR:
palz03021
]
118036410
Transcription factors [BR:
palz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
118036410
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118036410
RNA polymerase III system
TFIIIB
118036410
RNA polymerase I system
SL1/TIF-1B
118036410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
118036410
NCBI-ProteinID:
XP_034897981
LinkDB
All DBs
Position
13:5018556..5029408
Genome browser
AA seq
201 aa
AA seq
DB search
MAEQGGVEGSQPVDLSKHPSGIIPTLQNIVSTVNLDCKLELKQIALQARNAEYNPKRFAA
VIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFAAKFKDFKIQNIV
GSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRD
ETYTAFENIYPVLTEFRKVQQ
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcaaggaggcgtggaaggtagccagccagtggatctctccaagcatccttct
ggcattattcccaccctccagaacattgtttcaacagtgaacttggattgcaagctggaa
cttaagcaaattgccctgcaagcccgtaatgcagaatataatcccaagcgttttgctgct
gtcatcatgcggattagggaaccaaaaactacagcattgatttttgcctctggcaagatg
gtgtgcacaggtgccaagagcgaacagcaatctaaactggctgcgagaaagtatgctcga
attatccaaaagcttggctttgctgccaaatttaaggacttcaagattcagaatattgtt
ggctcctgtgatgtcaagttccccattagacttgaagggcttgcatactcccatggtgct
ttctcaagttatgaacctgaactctttccgggtctaatatatcgcatgaaacaaccaaag
atcgtgctccttatttttgtctctggaaaaattgtgatcactggagccaaggtgagagat
gagacatacacagcctttgaaaatatataccctgtccttacagagttcaggaaagtccag
caatga
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