KEGG   Populus alba (white poplar): 118036442
Entry
118036442         CDS       T07314                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16 isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
palz  Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:palz00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:palz01009]
    118036442
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:palz03036]
    118036442
Enzymes [BR:palz01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     118036442
Protein phosphatases and associated proteins [BR:palz01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118036442
Chromosome and associated proteins [BR:palz03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118036442
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 118036442
NCBI-ProteinID: XP_034898029
LinkDB
Position
13:complement(3988782..3998359)
AA seq 1264 aa
MGTELIRVHVKEENDDIPSVPPGFESFAAFTLKRVQDGEKQESNVTSCSATTSASESQSV
KMDTDFEDEAKVTRSLRRRPWIKFEHLDSCSEDESDSVKLNQQNLSLRSRLPKGVIRGCP
QCSNCQKVSARWHPESARKLDIEDAPVFYPTEEEFEDTLKYIASIRPKAEQYGICRIVPP
PSWKPPCLLKEKTIWEGSTFATRVQRVDKLQNRDSMRKRSTMSNHTRKKRRRCMRMAVDC
GTDIGSISGSNDAGVCEAERFGFEPGPLFTLDTFQKYADDFKAQYFRKNENAINKGGDMT
TFQKTCEPTLDNIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKTSNEVGSATNDRY
TKSGWNLNNFPRLPGSVLSFESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWG
AQKMWYGVPGKDAIKLEETMRKHLPDLFEEQPDLLHKLVTQLSPNILRSEGVPVYRCVQN
SGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQTAIELYCEQRRRTSISHDKLLL
GAAREAVRAHWELNLLKRNTLDNLRWKDVCGKNGILAKAFKERVETERVRRQFLCNSSPT
LKMESDFDATSERECSVCLFDLHLSAAGCHCSPDKFACLAHAKQLCSCAWGAKFFLFRYD
ISELNILLEALEGKLSAVYRWARLDLGLALTSFVSKDNTQDVKLSYSPIRTATEPVRSHT
PADPCRDLPWRAISSDIRMNSSGICSQIALEEEKKPPEGTPSKDVRASSVSHSSFQGIER
DNDNLKLNQKGSSLLSTNLRTLVCLLSQEDTSYAAGLASDKCEGKKPSTLGNNNVILLSD
DEGDEQKPILERAKENVSGKLSILHYSSCNDNKDSILTVPVVDGAVKSEKNVSLFPDEQK
NNSSSAPVVQVKDGYHQDGGKVLEFNQKNVSCHTGPSTAGFGRNVQNSSTNRDTSRDNGM
TDVGGQHPQPCGIGKLNNADKMGGNATSTSLDNSRIMAGSPSSSQNNLERHYRQKGPRIA
KVVRRINCNVEPLEFGVVLSGKSWCNSQAIFPKGFRSRVRYISVLDPANMCYYVSEILDA
GRNGPLFMVSLEHCPNEVFFHVSAARCWEMVRERVNQEITKQHKSGRMNLPPLQPPGSLD
GFEMFGFSSPAIVQAIEALDRNRVCTDYWDSRPYSRPQGQIPQHSQSIVSAGHSQGTHED
QTISKAPGSQFLPVEADTILRGLFKKASPEELTALSRILSGNKPTANPGLITQLLNEEIC
HRPR
NT seq 3795 nt   +upstreamnt  +downstreamnt
atgggaactgaactcattagagtacatgttaaggaggagaatgatgatatcccatcagtt
ccacctggtttcgagtcttttgcagctttcaccttaaaaagggtgcaagatggtgaaaaa
caagaaagtaatgtaaccagttgttcagccactacaagcgcttctgaatcacagtcagtc
aagatggacacagactttgaggatgaagcaaaagttacgaggtcccttcgacgcagaccc
tggataaagtttgaacatttggatagctgttcagaggacgagtctgattctgtgaagctt
aatcaacagaatctctccttaaggtctcgccttcccaagggagtgatccgtggatgtcca
caatgcagtaattgccaaaaggtcagtgcaagatggcatccagaaagtgcccgtaagctt
gatattgaggatgctcctgtattctacccaactgaagaggagtttgaagatactttgaaa
tatattgctagcatacggcctaaagctgaacaatatggaatctgtcgcattgttcctcct
ccttcttggaaacctccctgtctccttaaggaaaaaactatttgggagggctctacgttt
gcaactcgtgtccagagggttgacaaactgcagaaccgggactctatgagaaagaggtca
acgatgtctaatcatacaaggaagaaaaggagaagatgcatgagaatggcagtcgattgt
ggtacagatattggaagcatctcagggtcaaatgatgctggtgtttgtgaagctgagaga
tttgggtttgaacctggcccactgtttactttggatacatttcagaaatatgctgatgat
ttcaaggcccagtacttcaggaagaatgagaatgctattaataagggaggcgatatgaca
acgtttcagaagacttgtgaacctacattggataatattgagggcgaatattggcgaatt
gtagagaaagcaactgaagaaattgaggtcctttatggggctgatctggaaactggggtt
tttggcagtggttttccaaaaacatctaatgaagttggttctgcaacaaatgatcgttat
acaaaatcaggctggaacctgaataactttccgaggcttcctggatccgttctttccttt
gaaagtggggatatatccggtgttttggtgccatggctgtatatagggatgtgcttctcc
tccttctgttggcatgtcgaagatcatcacctatattcactgaattacatgcattggggc
gcacaaaagatgtggtatggtgtgccagggaaggatgccattaaattggaagagaccatg
agaaagcatttacctgatctttttgaagaacaacccgacttgcttcataagctggtgact
cagctttcccccaacatactaagatctgaaggagtgcctgtctatcgttgtgttcagaat
tccggagagtttgtgctaacctttcctcgagcatatcattcggggtttaattgtggtttc
aattgtgcggaggcagtgaatgtagctcctgttgactggttgccccatggacagactgct
atagagctgtactgtgagcagagacggaggacttccatctcccatgataaactgttgctt
ggggcagcaagggaagcagtcagagcacattgggaactgaatttacttaagaggaatacc
ttggataacttaagatggaaagacgtgtgtggaaagaatggaatattagcaaaagcattc
aaggaacgtgtggagacagagcgtgtgaggagacaatttctctgcaactcttccccaaca
ttgaagatggagagtgattttgatgccacaagtgagagggaatgcagtgtttgccttttt
gatttgcatctgtctgcagcagggtgtcattgctctccagataagtttgcatgcttggct
catgcaaagcagttgtgctcatgtgcttggggtgccaaatttttcctgtttcgctatgat
atcagcgaattaaatatcctcctggaggcattggagggaaaattgagtgcagtgtaccga
tgggcaagactagatcttggactcgctctgacgagtttcgtttccaaggacaacacgcaa
gatgttaaattatcttattctccaataagaacagcaactgaacctgtgagatcacacaca
ccagcagatccttgtagagatttaccatggagagcaatatctagtgatattagaatgaat
tcatctgggatctgtagtcagatagcattggaagaagagaagaaaccacctgaaggcact
ccttcaaaagatgtgagggcatcatctgtatctcatagttcttttcaaggaattgagagg
gacaatgacaatttgaagctaaaccaaaaaggttctagtcttttgtctaccaatttaaga
acgctagtttgcctgttgtctcaagaagacacatcttatgctgcaggcctggcttcagat
aaatgtgaagggaagaagccttcaactttgggtaataacaatgttattcttcttagtgat
gatgaaggtgatgaacagaagccaattttagaaagggcaaaagaaaatgtttccgggaag
ctatcaattttgcattatagttcatgtaatgacaataaagattcaatcttaactgttcct
gtggttgatggagcagttaagagtgaaaagaatgtcagtttgtttcctgatgaacaaaaa
aataattcttcatctgctcctgtggtgcaagtgaaggatggctatcatcaagatggtgga
aaggttttggaatttaatcaaaagaatgtttcttgccacacaggtcctagcacagcagga
tttggtaggaatgttcagaattcctcaactaatagagataccagtagggataacggaatg
acagatgttgggggtcagcatccacagccatgtggcattggaaagcttaacaatgcagac
aagatgggaggaaatgccacctcaacttcattggacaactcgagaattatggcaggtagc
ccatcttcctcacaaaataacttggagagacactaccgccagaagggtccccgaattgcc
aaggtagtgcgaaggatcaattgcaatgttgaacctctggaatttggggttgtgctttct
ggaaagtcatggtgcaacagccaagcaatttttcccaaaggatttagaagtcgagttagg
tacataagtgttctagatccagcaaatatgtgttactatgtctccgaaatactggatgca
gggcgaaacggtcctctatttatggtttccttggagcattgcccaaatgaggtatttttt
catgtttcagcagccagatgctgggaaatggtgagagagagagtgaatcaggagatcaca
aagcagcataaatctggaagaatgaatcttcctcccttacaacctcctggaagtcttgat
ggctttgaaatgtttgggttttcttcaccagcaattgtgcaggccatagaagcattagac
aggaatcgagtttgtacagattattgggactccaggccatattcacggccacaaggacag
attccgcaacattctcaatccatagtcagtgcagggcattcccagggaacacatgaggac
cagactattagtaaagcccccgggagccagtttttaccagttgaagctgatacgattctt
agaggtctattcaagaaggcaagcccagaagaattgaccgcactgagtcgtattttaagt
ggcaataagccaacagctaatcctggtctaatcacacagcttcttaatgaagagatttgc
caccgtcctagatga

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