Populus alba (white poplar): 118036472
Help
Entry
118036472 CDS
T07314
Name
(RefSeq) protein CHROMATIN REMODELING 20
KO
K10779
transcriptional regulator ATRX
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palz03000
]
118036472
03036 Chromosome and associated proteins [BR:
palz03036
]
118036472
Transcription factors [BR:
palz03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
118036472
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
118036472
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
118036472
NCBI-ProteinID:
XP_034898067
LinkDB
All DBs
Position
13:complement(4150473..4168534)
Genome browser
AA seq
1489 aa
AA seq
DB search
MEDKHEEVEDIESGLSDSFIDDDDDDDSDNDDDNEPSTSGQDDGTRIQEPLTDQEVEELV
AEFLEVESKAAEAQEALEKESLAKIESDVREELAQSLQGDDLEAAVEDEMATFREEWENV
LDELETESYHLLEQLDGTGIELPSLYKWIESQAPNSCCTEAWKRRAHWVGTQVTKETTDT
VADAEKYLQIHRPVRRRHGKLLEEGASGFLQKKLAMDGSEAIAENGEVDWASMKKLFSTS
SSEDVASFGSRHWASVYLANTPQEAALMGLKFPGVNEVEEIEDIDGNSSDPFVAEAIANE
KELVLSEEQRKNYRKVKEEDDAKIDQKLQLRLKQRRCLKRRKQGVSSVVQEMGTNMAESL
PLDDNYHEATCQDLKKDVCENSGDLDMEQLMNESNSVFPESDASEPRRSKRPNESEDLSI
NNKKIRTVIIDSDNEADILEDKSVHGIKVEDQSTLLENIGDSSAGCNPSLGSSEKFQCTA
CDKVAVEVHSHPLLKVIVCKDCKFLMEEKMHLKDPDCSECYCGWCGRNNDLVSCKSCRTL
FCTACIKRNIGEEYLYKVPVSGWQCCCCSPSLLQRLTSQLEKAMGSGDIMVSSSDSDSDS
SDTNDGVTISSKRKKKKKIRRIIDDAELGEETKRKIAIEKERQERLKSLKVKFSDKSKMM
NFASCSGNLPEGTSVEVIGDATTGYIVNVVREKGEEAVRIPPSLSSKLKAHQVAGIRFLW
ENIIQSIRKVKSGDNGLGCILAHTMGLGKTFQVIAFLYTAMRGVDLGLRTALIVTPVNVL
HNWRKEFMKWTPSEVKPLRVFMLEDVSRERRVELLAKWRAKGGVFLIGYSAFRNLSLGKN
VKERNMAREMCSALQDGPDILVCDEAHIIKNTRAETTQALKLVKCQRRIALTGSPLQNNL
MEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTVDDVKIMNQRSHILYEQLKGFV
QRMDMSVVKKDLPPKTVFVVAVKLSPLQRKLYKRFLDVHGFTNDRASNEKTSKSFFAGYQ
ALAQIWNHPGILQLRKGREYVGNVENFLADDCSSDENVDYNTIVEEKSRNPNDFIQGKSD
DGFFQKDWWNDLLLENNYKEVDYSGKMVLLLDILVMSSDVGDKTLVFTQSIPTLDLIELY
LSRLPRLGKKGKFWRKGKDWYRLDGRTESSERQRLVERFNDPKNKRVKCTLISTRAGSLG
INLYAANRVVIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKE
GLAARVVDRQQVYRTISREEMLHLFEFGDDENSDTLIDIGQEYRQADTRNISCQTANSLK
QNASRSHGSCASDKVMESLLGKHRQRWIFDYHEHETLLQENEEEKLTKEEQDMAWEVYKR
SLEWEEVQRVSLDDSTFERKPPMSNGASSAPDASSIPVPSMARPASEASNGAPSQSILRS
RMVQRKCTNLSHLLTLRSQGTKAGCTTICGECAQEISWEDLKREGKAAR
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaacacgaggaagttgaggacattgagagtggtttaagtgattcatttatt
gacgacgacgacgacgacgattctgataatgatgatgataatgaaccttctacatctgga
caagatgatgggacccgtattcaggaacctttgaccgaccaagaagtagaggagttggtt
gctgagttcctggaagttgagagtaaggctgcagaggctcaagaagcactggaaaaggag
tctcttgctaaaatagagagtgatgtgagagaggagttggcacaaagtctccagggtgat
gatctggaggcagctgttgaagatgagatggctactttcagggaagagtgggaaaatgtg
ctcgatgagctcgagactgagagttatcatttgttggagcaacttgatggtactggtatt
gagctgccaagcctttataagtggattgagagccaggctccaaacagttgctgcactgaa
gcttggaaaagaagggcacactgggtgggaactcaggtgaccaaggaaacaactgataca
gtagctgatgctgagaaatatcttcaaatccataggcctgttagacgacgacatggtaaa
ttattggaggagggtgcaagtggatttctgcagaaaaaacttgcaatggatggaagcgag
gctattgcagaaaatggagaagtagattgggcctctatgaagaaactattctcaactagc
agttctgaggatgttgcttcatttggcagcaggcattgggcttctgtttaccttgccaac
actcctcaggaagctgcacttatgggacttaaatttcctggagtcaatgaggttgaggag
attgaagacattgatgggaattcctctgatccatttgttgcagaggccatagcaaatgaa
aaggaattagttctttcagaggaacagagaaaaaattacagaaaggtcaaagaggaagat
gatgcaaaaattgatcagaaacttcaacttcgtttgaaacaaaggagatgtcttaagaga
cgtaaacagggtgtcagctcagtcgtccaggaaatgggaacaaacatggctgagtcactg
cctctggatgacaattatcatgaggccacatgccaagatttgaagaaagacgtgtgtgaa
aattctggagaccttgatatggaacagttgatgaatgagagcaattcagttttcccagaa
tctgatgcctctgaacccagaaggtccaagcgtccaaatgagagtgaggacctaagcatc
aataataagaagattcgaactgttatcatagacagtgacaatgaagcagacattttggag
gataaatcagtacacggcattaaagttgaggatcaatcaactttgctagaaaacattggg
gactcttctgctggctgcaatccttcactgggttcaagtgagaagtttcagtgcactgcc
tgtgataaagttgctgttgaagtgcactcgcatccacttttgaaagtaattgtttgcaaa
gattgtaaattcttaatggaggaaaaaatgcatttgaaggatcctgactgttctgagtgt
tactgtggatggtgtggaagaaacaatgacttggtaagttgtaagtcatgcagaacatta
ttctgcactgcttgtataaaaaggaacatcggtgaagagtacttgtataaggttccagtt
tctggttggcaatgttgttgttgctctccaagtctgctacaaagacttacatcacagtta
gagaaagccatggggtctggagatataatggtttcaagttctgatagtgattcagactct
tcagatacaaatgacggtgttacaatcagctctaagagaaagaagaaaaagaagattaga
agaatcattgatgatgctgaattaggagaagagaccaagagaaaaattgctattgaaaag
gaacgtcaagaacgcttgaaatccctgaaagtcaagttttctgacaaatccaagatgatg
aattttgcaagctgtagcggaaacttacctgaaggtactagtgttgaagtgattggtgat
gccacaactggttatattgtgaatgttgtgagggaaaaaggtgaagaagctgtgaggatt
cctccaagcttatcatctaaattgaaagcccatcaggtggcagggataagatttctgtgg
gaaaatattatacagtcaattagaaaagtgaagtccggggataacggtcttggttgtatt
ttagcgcatacaatgggccttggtaaaacttttcaggtcatagcttttctgtacactgcc
atgagaggtgttgatctgggtttaagaacagcactcattgtgactcctgtgaatgtgctg
cataactggcgcaaggagttcatgaagtggacaccttcagaagtaaagccactccgtgtt
ttcatgctggaggatgtgtcgagggagagaagagtggaattgcttgcaaagtggagagct
aaaggtggtgttttcttgataggctactctgcctttcggaacttatctcttggaaagaat
gtgaaggaacggaatatggctagagaaatgtgtagtgccttgcaggatggacctgatata
cttgtttgtgatgaagcccacatcatcaagaacaccagagctgaaacaacccaggcactg
aaactcgttaaatgccagagaaggatagcattaactggatcacctcttcagaacaatcta
atggagtattattgtatggttgattttgtaagagaaggttttcttggcagcagccacgag
tttcggaaccgcttccaaaatcctatagaaaatggacaacatactaattcaacggttgat
gatgtaaagataatgaaccaaagatctcatattctctatgaacaattgaaagggtttgtt
caaagaatggacatgagtgtggtgaagaaagacctgccacctaaaactgtatttgtagtg
gctgtaaagctctcgccattacagaggaaattgtacaagagattccttgatgtgcatggg
ttcacaaatgatagggcttcaaatgaaaagacgagtaagagcttttttgctggttaccag
gcattggctcagatatggaaccatcctggaattttgcaattgaggaaagggagagaatat
gttggcaatgttgaaaactttcttgcagatgactgctctagtgatgaaaatgtggactac
aatacaattgttgaagagaagtcaaggaatccaaatgattttattcaagggaaaagtgat
gatggattctttcaaaaggattggtggaatgatcttctacttgaaaataattataaagag
gttgattacagcggcaaaatggtattgctgcttgacattttagtcatgtcttctgatgtg
ggtgataagacgttggtttttacccagagcatacccactttagatctgatagagctttat
ctttcaagattacctcgacttggaaaaaagggaaagttttggagaaaaggaaaagactgg
tataggctagatggaagaacagagagctctgaaagacagaggttggttgagaggttcaat
gatcccaagaataaacgggtcaagtgtactttgatttctaccagggctggttctcttggg
attaatctctatgctgctaaccgggtggttattgttgatggctcttggaatccaacgtat
gatcttcaggccatatatcgggcttggaggtatggccagactaagccagtgtttgcttac
agattaatggcacatggaaccatggaagaaaaaatctataagcgtcaggtaacaaaggag
ggacttgctgcaagggtggttgatagacaacaagtatataggactatctccagagaagaa
atgttgcatctttttgaatttggtgatgatgagaactcagacacactgattgacattggc
caagagtatagacaggcagataccaggaatatttcttgccaaactgcaaattctttgaaa
cagaatgcgtctcgttctcatggaagctgtgcttctgataaagtgatggaaagcttgctt
ggcaagcaccgtcagaggtggattttcgattaccatgaacatgagactcttttgcaagag
aatgaagaggaaaaactaacaaaggaggagcaagacatggcttgggaagtgtataagaga
tcattagaatgggaagaagtgcagcgagtttccctcgatgattccacttttgagcgaaag
ccacccatgtcaaatggggcatcttctgccccagatgcaagcagcatacctgtgccaagc
atggcccgtcctgcatctgaggcttccaatggagcaccttcccagagcattttaaggagt
cgaatggtgcagcggaaatgtactaatctctctcatttgctgacccttagaagtcaggga
acgaaagctgggtgcactactatatgtggggaatgtgcccaggagataagctgggaagat
ctgaaacgggagggtaaggcagcacggtaa
DBGET
integrated database retrieval system