Populus alba (white poplar): 118036482
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Entry
118036482 CDS
T07314
Name
(RefSeq) peroxisome biogenesis protein 12 isoform X1
KO
K13345
peroxin-12
Organism
palz
Populus alba (white poplar)
Pathway
palz04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
118036482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118036482
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
118036482
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
PRIMA1
NinF
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
118036482
NCBI-ProteinID:
XP_034898088
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Position
13:complement(4082494..4087422)
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AA seq
393 aa
AA seq
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MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVMALRRPFLHKVLDYEDEFFSLLM
SVLETHSLRTTDASFAESLYGLRRRAVKIRVKKEDARPRSGDGIQHSGLEKHQRILSVVF
LVVLPYFKSKLHSIYNKEREARLQASLWGTGDETVEDAEYFSGGDASLVSRETLDAEATI
RARLTKKIQKIVFSCYPWLHASSEGMSFAYQLLYLLDATGFYSFGLHALGIHVCRATGQE
LMDTSSRISKIRSNERDRLRGPPWLKTLQGALLSCAYTMLDYAQTGLIAAVFIFKMMEWW
YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPPDRTICPLCSQMRANPSVVTISGFVFC
YACIFKYVSQYNRCPVTLMPANVDQIRRLFHDM
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgttatttcaagtaggaggacaagggacacgtcccaccttcttcgagatggctgctgcc
caacaactccccgccagtctccgtgctgcccttacctactccattggtgtaatggcatta
agaagaccgtttctgcataaggtgttggactatgaagatgaattcttttcgttgcttatg
tcggtccttgagactcatagcttgcgtactacagatgcttcttttgctgaatctctatat
ggattgcgaagaagggcagtgaagataagagtaaagaaggaagatgcacgtccaagatca
ggggatggaattcagcactcaggtctagaaaagcaccaaagaattctttcagttgtattt
ttggttgtgttgccttattttaagtcaaaattgcattcaatatataacaaagaaagggaa
gccaggcttcaagcaagtttgtggggaactggcgatgaaacagttgaagatgctgaatat
tttagtggaggggatgcttctcttgtttctagagaaacattggatgcagaagcaactatt
agagcacgtttgacaaagaaaattcagaaaattgtatttagttgctacccatggctgcat
gctagtagtgaaggaatgtcatttgcatatcagctcttatatttgctggatgctactggg
ttctattcgtttggactacatgcacttgggattcatgtttgtcgagctactggtcaagag
ctgatggatacttcttctagaatttctaagataagaagcaatgagcgtgatagacttcgt
ggccccccatggctgaagacattacaaggtgcattgctgagctgtgcatatacaatgctt
gactatgcacaaactggcttaattgcagcagtgttcatctttaaaatgatggagtggtgg
taccaatctgctgaggagagaatgtcagctccaacagtgtaccctccacccccaccacct
ccacccccaaaggttgccaaagaggggattccactgccacctgatagaacaatctgccca
ttgtgctcacagatgcgtgcaaatccttctgttgttacaatctcgggatttgttttctgt
tatgcttgcatattcaaatacgtatctcagtataaccgctgcccagtcacattgatgcca
gcaaacgttgatcagataaggaggttgttccatgatatgtag
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