KEGG   Populus alba (white poplar): 118036626
Entry
118036626         CDS       T07314                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4 isoform X2
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
palz  Populus alba (white poplar)
Pathway
palz03020  RNA polymerase
palz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    118036626
  09124 Replication and repair
   03420 Nucleotide excision repair
    118036626
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:palz03021]
    118036626
   03400 DNA repair and recombination proteins [BR:palz03400]
    118036626
Transcription machinery [BR:palz03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     118036626
DNA repair and recombination proteins [BR:palz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      118036626
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 118036626
NCBI-ProteinID: XP_034898274
LinkDB
Position
16:complement(171055..173832)
AA seq 197 aa
MEKGGGKGFSLPSKEPKSSLKSSSTKGKDDSNKGRKIHFESEGNLSKGGKGGKIANGGKS
PMTKEPPPLELKIESELPQNVKPLMDCEAAQILQGIQDQMVLLSQDPTIKLPVSFDKGLQ
YAKNGAHYTNPQSVRRVLEALRKYGVSDGEISLIANVFPETADEAFALVPSLKSKASTLR
EPLKDILGELAKFKQPA
NT seq 594 nt   +upstreamnt  +downstreamnt
atggagaaaggaggaggaaaagggttctctctaccatccaaagagcctaagtcttctctc
aagtcctcatcgactaaaggaaaggatgattcaaataaaggaaggaaaatccattttgag
tctgaaggtaatttgagcaagggggggaaaggaggcaagattgcaaatggtgggaaaagt
ccaatgacaaaagaaccacctccacttgagctaaaaattgagtcagaactcccacagaat
gtcaaacccctgatggattgtgaggcggcacaaatcttacaaggaatccaggaccagatg
gttctgctgtctcaggatccaactatcaaacttcctgtgtcatttgacaaggggttgcag
tatgctaagaatggtgcccattatacaaaccctcagtctgttagacgagttcttgaggct
ttgagaaaatatggtgtctctgatggagagatatctctaattgccaatgtctttcctgaa
actgctgatgaagcttttgcacttgtcccatctttgaagtctaaggctagcacacttaga
gaacccctgaaggacattttaggcgagctagctaagtttaaacagccagcatga

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