Populus alba (white poplar): 118036891
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Entry
118036891 CDS
T07314
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118036891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118036891
03016 Transfer RNA biogenesis [BR:
palz03016
]
118036891
Enzymes [BR:
palz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
118036891
Messenger RNA biogenesis [BR:
palz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
118036891
Transfer RNA biogenesis [BR:
palz03016
]
Prokaryotic type
tRNA degradation factors
118036891
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
Urease_gamma
KH_PNO1_2nd
KH_1
OB_PDCD11
Motif
Other DBs
NCBI-GeneID:
118036891
NCBI-ProteinID:
XP_034898636
LinkDB
All DBs
Position
1:38671398..38682444
Genome browser
AA seq
965 aa
AA seq
DB search
MPSIMAASRSNPLLNSLPRFLTWRSLGFRTICSGRLGFAPSDPDPEPPVSTAGTKFLETF
REEFEIGSRLITFETGKIARFANGSVVLGMEETKVLSTVTSSKGDSVRDFLPLTVDYQEK
QFAQGVIPSTYLRREGAPKERELLCGRLIDRPIRPLFPAGFYHEVQVMASVLSSDGRRDP
DVMAANATSAALMLSDIPWGGPIGVIRVGRICGQFVVNPTMDELSLSDLNLVYACTKDKT
LMIDVQAGGISEKDLEAGLRLAHPEAVKYLEPQIRLAAKAGKHKKDYKLSLVSDRTLEKV
RNLTEAKIEAVFTDPSYGKFERGEALDNIAQEVKRTLEEECDTESVTVLSKVVDRVRKGV
VRNRILAEGFRVDGRHLDEVRPLYCEAGYLPNLHGSSLFSRGDTQVLCTVTLGAPRDAQR
LDSLVGPPTKRFMLHYSFPPFSINEVGKRVGLNRREVGHGTLAEKALLAVLPPEDDFPYT
VRINSEVMASDGSTSMATVCGGSMAMMDAGIPLQEHVAGVSVGLVSEVDPSTGEIKDYRI
VTDILGLEDHLGDMDFKIAGTRKGVTAVQLDIKPAGIPLDIICECLEPALKGRLQILARM
DQEISAPRTQDHRNSPRLATLKFSNDALRRLIGPLGVLKRKIEEDTGARMSVSDETLTIL
AKNQTVLERVQEKIDFIIGREIEVGGIYKGIISSIKEYGAFVEFNGGQQGLLHVSELSHE
PVSKISDVISVGQQLSLMCIGQDVRGNIKLSLKATLPQLKSKKNNVTEEPVPVIKEAPKV
WTSVGNLPNEQEEQKITDAELMLSRSTVKPSTSSNPGFLIRSAAECDEEDKTVSLNQGSK
SNSKTLRATKRDRKQKTKVPESDDSDASIYSSGHSSHTVDHLNDEDAKVVSPLSAKSLRL
GMKIAAKVYQIRALGLVLDLGNGVRGMYRFETNGKRDFEIGDELLVKCTSFSSKGLPVMS
LVDDQ
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgataatggcagcaagtagatcaaatcctcttctaaactcgctccctcgcttc
ctcacatggcgatccttagggttccgcaccatttgtagtggccgtctcggcttcgctccc
tccgatcctgacccggaaccacccgtttccaccgccggtaccaagttccttgagaccttt
agagaagaattcgagatcggttcgcgcttaatcacttttgaaactggaaaaattgctcga
ttcgctaatggctctgtcgttttggggatggaagagactaaagtgctttctactgtcact
tcttctaaaggcgattctgttcgcgattttttgcctctcacagttgattatcaagaaaag
caatttgctcaaggtgtgattcctagtacttacctgcgaagagagggtgcaccgaaagaa
cgcgaacttttatgtggtcggcttattgatcgacctataagaccactctttcctgctgga
ttttaccatgaggttcaggttatggcaagtgttctttcttcagatgggagacgtgatcca
gatgtaatggcagctaatgcaacgtctgccgctcttatgctgtctgacattccttggggt
ggtcccattggagtgattcgcgtaggaagaatttgcggacagtttgttgttaatccaacc
atggatgagcttagcttaagtgatctgaacttagtatatgcctgtacaaaggacaaaact
ctaatgatagatgtgcaagctggtgggatctcagagaaagatctagaagctgggttaaga
ctggcacatccagaggcagtgaagtatcttgaacctcaaatcagactagccgcgaaagct
gggaagcataagaaggattacaaactatctttggtgtcagatagaacattggaaaaagtt
cgaaacttgacagaagcaaagattgaagctgtctttacagatccttcgtatggtaagttt
gagcgtggagaagccttagacaatattgcacaggaagtaaaaagaacccttgaagaagaa
tgtgatacagaaagcgtaacagttctttcgaaggttgtagacagagtacgaaagggggtt
gtccgcaacaggattcttgcagagggatttagagttgatgggagacaccttgatgaagtg
aggccattgtattgtgaagcaggttatttacctaatttgcatggatcttcacttttttct
cgtggagatacccaggttctttgtactgtcactcttggtgcacctagggatgctcaacgt
ttggattccttggtcggacccccaacaaagcgtttcatgcttcattatagtttccctcca
ttttcaattaatgaagttggcaaaagagttggtctgaacagacgtgaagttggtcatgga
actcttgcagagaaagccttgcttgctgttttgcctcccgaggatgattttccatataca
gttcgcatcaattcagaagtaatggcatctgatggttcaacttcaatggcgactgtttgt
ggaggcagtatggccatgatggatgctggcatcccattgcaagaacatgttgctggtgtt
tcagtgggtcttgttagtgaagttgatccatcaactggtgaaattaaggactatcgtata
gtgactgatattttgggcctggaagatcatttaggggacatggacttcaaaattgctgga
acacgtaagggagttactgcagttcagttggatataaaacctgctggaattcctttagat
atcatttgtgagtgtttagagccagctcttaaagggcgtcttcaaatccttgcccgcatg
gatcaagagattagtgcaccacgcactcaggatcatagaaattctcctcgattggctacc
ttaaagttcagcaatgatgctcttcgtcgcttgattgggcctctaggtgttcttaagaga
aaaattgaagaggatacaggtgcacggatgtctgtaagcgacgaaacacttactatactt
gccaagaatcagactgtactggaaagagtgcaagagaagattgattttataatcggccgt
gaaattgaagttggtgggatttacaaaggcatcatttcttcaataaaggaatatggtgct
ttcgtggagtttaatggtggccagcaaggtctgctacatgtttctgaattatcacatgaa
ccggtctccaagatttcagatgtcatatctgttgggcagcagctttccttgatgtgcata
gggcaggatgtacgtggcaacatcaaattatcccttaaagcaactttaccccagttgaaa
tctaagaaaaataatgttactgaggaacctgttcctgttattaaagaagcacctaaagtt
tggacctcagttgggaatttgcctaatgaacaagaagagcagaaaattacagatgctgag
ttgatgttaagtaggagcactgtaaagccttcaacttcctcaaatcctggttttctgatt
cgaagtgctgcagagtgtgacgaggaggacaaaactgtcagtttgaatcagggttctaag
agcaattctaaaactttacgggctacgaaacgggatcgcaagcaaaaaacaaaggtgcct
gaaagtgatgattctgatgcatcaatctatagttctggtcactcttcacatactgtcgat
catttgaatgacgaggatgccaaagtggtgtcacctttgagtgcaaaaagcctgagactt
ggaatgaagattgctgccaaggtttatcaaattcgtgcacttgggttagtccttgatttg
ggtaatggagttcgtggaatgtatcggtttgagaccaatggaaagagggactttgagatt
ggtgatgagttgctagtcaagtgtacaagcttttctagcaagggacttccagttatgtcc
ttggtggatgatcagtga
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