Populus alba (white poplar): 118036922
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Entry
118036922 CDS
T07314
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00500
Starch and sucrose metabolism
palz01100
Metabolic pathways
palz01110
Biosynthesis of secondary metabolites
Module
palz_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
118036922
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
palz01003
]
118036922
Enzymes [BR:
palz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
118036922
Glycosyltransferases [BR:
palz01003
]
Polysaccharide
Storage polysaccharide
118036922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glyco_trans_1_4
Glycos_transf_1
Glyco_trans_4_4
DUF2388
Kazrin
COG4_N
Flg_hook
Seadorna_VP6
Motif
Other DBs
NCBI-GeneID:
118036922
NCBI-ProteinID:
XP_034898674
LinkDB
All DBs
Position
1:complement(39252416..39263337)
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AA seq
1072 aa
AA seq
DB search
MATKLSTCFLSHRHATALNCNAITTTTNDPKHTNVRFLLPCHRLLSSSSFRIRNRNSRSS
QYKRRQMKKSSSTEDSESHQPQPQPQPQPQSQPQPPPTVFSAVPNDVAGASVFVDSETST
SVDVERIEQLTDAQNPQRLTVSQEAKSLAIDINIEEDEKHSSASDEMKQLAVNMGGGEQL
SSIQLEDLIGMIRNAEKNTLLLNKARVFALDDLERIFHEKDKLQGEINVLEMRLAENDAK
MKVAAQEKIRVELLEAQLEKLRNELDQRGATERSVFDLYESQNNVFNKEAPLLQNNTLLQ
NSSVHSLSDELSLLRSENMSLKNDIEALREELSNVKNTDERVAILVKQHSLMKSSLQDLE
SKLIASEEDVSKLSSLKVECKDLWETVYTLQALLDKATKRADQAILVLQQNQDLRKKVDK
LEESLEEAVVYKLSSEKLQQYNELIQQKMKLLEEHLQRSDEEIHSYVRLYQDSVQEFQDT
LKSLKEESNKRALDEPIDDMPWEFWSHLLLIIDGWLLEKKISTDDAKHLREMVWKRDGRI
CEAYMESREKNEREAVSRFLKLTSSSKSYGLSIIHIAAEMAPVAKVGGLGDVVTGLCKAL
QKRGHLVEIVLPKYDCMQYDRINNLRALDVVVESYFDGKLYKNKIWVGTVEGLPVYFIEP
QHPEKFFWRGQFYGEHDDFRRFSFFSRAALELLLQSGKKPDIIHCHDWQTAFVAPLYWDL
YAPKGLNSARICFTCHNFEYQGTAPASELASCGLDVHQLNRPDRMQDNSAHDRVNPVKGA
VVFSNIVTTVSPTYAQEVRTAEGGKGLHSTLSFHYKKFVGILNGIDTDAWNPATDTSLKV
QYNVNDLQGKTENKIALRKFLGLSNADVRQPMVGCITRLVPQKGVHLIRHAIYRTLELGG
QFVLLGSSPVAHIQREFEGIANHFVSHHHIRLILKYDESLSHSIFAASDIFIIPSIFEPC
GLTQMIAMRYGSIPIVRKTGGLNDSVFDVDDDTVPPQFRNGFTFSTPDEHGVNSALDRAF
NYYRNNTEVWQQLVQKDMNMDFSWELSTSQYEELYLKSVARARGASNRAQGL
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaaactatcaacttgttttctgagccatcgccatgctactgctttaaattgc
aatgctattactactactactaatgatcccaagcacactaatgttcgattcttgttgcct
tgtcatcgattgctctcatcctcctctttcagaatacggaatcgcaactcgagaagctcg
cagtataagcgtagacaaatgaagaaatcttcttctacagaggattccgagagtcatcaa
ccacaaccgcaaccgcaaccgcaaccgcaatctcaacctcaaccccctcctacggtgttt
agtgctgtaccaaatgatgttgctggcgctagcgtattcgtagattcggaaactagtact
agtgtagatgtggagcggattgagcaactcactgatgcacaaaatccacaacgtcttact
gtgtcccaagaagccaaatctttggctattgatattaacatagaggaagatgagaagcat
tcaagtgcatctgatgaaatgaaacaattggctgtaaacatgggtggcggagagcaactt
tcaagtattcaacttgaagatttgataggcatgataagaaatgctgagaaaaatactctt
cttctcaacaaagctcgggtttttgcgcttgatgaccttgaaagaatttttcatgagaag
gacaagttgcaaggagaaattaatgttttggagatgagattggcagaaaatgatgctaag
atgaaggttgccgctcaagaaaagatacgtgtggaactcctggaagcccagttggagaaa
ctaaggaatgaactagatcagaggggtgctactgagagaagtgtgtttgatctgtatgag
agccaaaacaatgtttttaacaaggaagcccctctacttcagaataacactctacttcag
aatagcagtgttcattctcttagcgacgagcttagtttattgaggtcggagaatatgtct
ctgaaaaatgatatagaagcactcagggaagagcttagtaatgtcaagaataccgatgaa
cgtgttgcaatactggtgaagcaacactctttgatgaagtcttctctgcaagacctggag
tccaaactaatagcttctgaggaagatgtttcaaaattatctagtctaaaagttgaatgc
aaggacttatgggagacggtgtatactttgcaagcactgctggataaggcaaccaagcga
gcagatcaggctattcttgtgttgcagcaaaaccaggatctccgaaagaaggttgataaa
ttggaagaatccctggaagaagccgttgtttataagctatcatcagaaaagttgcagcaa
tataatgaactaatacagcaaaagatgaaactattggaggagcacctccagaggtctgat
gaagagatacattcttatgtccgattgtatcaagattctgtacaagaatttcaagataca
ctcaagagtttgaaagaggaaagcaataaaagggcactggatgaacctatagatgatatg
ccctgggaattttggagtcatttactgctcataattgatggttggctgctcgagaagaaa
atatctacagatgatgcaaagcatttgagagaaatggtatggaagagagatgggcgtatt
tgcgaggcatacatggaaagcagagaaaagaatgaacgtgaagctgtgtctaggtttctc
aagctgacatcatcatccaaaagttatggattatctatcattcatattgcagcagagatg
gcaccagttgccaaggttggtggtttgggagatgtcgtgactggtctatgtaaagcacta
caaaagagaggacaccttgtggagattgttctgcctaaatatgattgcatgcaatatgat
cggattaacaacttgagggccctagatgtggtggtggaatcatattttgatggcaaatta
tacaaaaataaaatatgggttggaacagttgaaggtctcccagtttactttattgagcct
cagcaccctgaaaagttcttttggagaggacaattttatggagagcatgatgatttcaga
cgtttttcatttttcagccgtgcagcacttgagttacttcttcaatctggcaaaaaacca
gatataattcattgtcatgactggcagacagcttttgttgcaccactctattgggattta
tatgccccaaaagggttgaattcagccagaatatgttttacatgccacaactttgagtac
caagggactgctcctgcatcagaattggcatcttgtggacttgatgtccatcagctgaat
agaccagatcgaatgcaagacaactctgcacatgatagggtcaatcctgtcaagggtgca
gtggtattctcaaacattgtgacaacagtatcacctacctatgcacaagaggtgcggact
gctgagggcgggaaaggtctccattcaactcttagttttcactacaagaagtttgttgga
attcttaatggaattgatactgatgcatggaatcctgctacggatacttctctcaaagtc
cagtacaatgttaatgatcttcaagggaaaactgaaaacaaaatagctttaagaaaattt
cttgggctctctaatgcagatgtcaggcaaccaatggtaggctgcataacacgattggtg
ccacagaaaggtgtgcatcttattagacatgcaatataccgaacactggagctgggagga
caatttgtacttcttggttcaagcccagttgcacatattcagagggaatttgagggtatt
gctaaccattttgtgagtcatcatcacattcggctgatattgaagtatgatgaatctctc
tcccattccatttttgcggcatctgacatttttatcatcccatcgatttttgagccttgt
ggcctcacacagatgatagcaatgagatatggttccataccaattgtaagaaaaactggt
ggtctaaatgacagtgtttttgatgttgatgatgataccgtgccgcctcaatttcggaat
ggctttacattctcgactcctgatgaacatggagtaaacagtgctttagatcgcgcattt
aactactatagaaacaataccgaggtctggcagcagcttgttcagaaggacatgaacatg
gatttcagttgggaattgtcaacatcgcaatatgaagaactttacttgaagtcagtggcc
agagcaaggggggcatcaaatcgagctcaaggattgtaa
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