Populus alba (white poplar): 118036931
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Entry
118036931 CDS
T07314
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palz03036
]
118036931
Enzymes [BR:
palz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118036931
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Meiosis-specific proteins
Others
118036931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
HHH_5
Cdd1
DNA_pol_lambd_f
TTC3_DZIP3_dom
AAA_22
IMS_HHH_1
HHH
Motif
Other DBs
NCBI-GeneID:
118036931
NCBI-ProteinID:
XP_034898686
LinkDB
All DBs
Position
1:complement(38715682..38724497)
Genome browser
AA seq
1239 aa
AA seq
DB search
MDSYTLKSVSDLPPPFRSIFSFRYFNSLQSECFPVCYHSDVNMVISAPTGSGKTVLFELC
VLRLLSRFVSEGRFVHVKGMLKTIYIAPSKALVQEKLRDWTQKFGSLGINCLELTGDNEF
YNTRTIQEADIILTTPEKFDSVTRYRIKDGGLSFFSDIGLLLIDEVHLLNDPRGAALEAI
VSRIKMLAHKPEMKSSPLSCVRFLAVSATIPNIEDLAEWLNVPVQGIKRFGEEMRPVKLT
TKVFGYAPAKNDFLFEKRLQNYIFDILMHYSRGKSALVFCSTRKGAQEAALKLSQTAMTF
GYSNPFIKDKEQQERLREASLSCSDKQLQSYILYGVGYHNGGLCLKDRSLIEGLFLKGDI
KILCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSMILQMCGRAGRPPFDDTGM
VIIMTRRETVHLYENILSGCEMVESQLLSCVTEHLTAEIVQLTVSDIARAIEWMKCSYLY
VRIKKNPEHYAVKQGISRDRIEKQMQEITVQKVNELSHHQMIWTDKDGFLLKPLEPGRLM
TRYYLKFNTMKHVMQTPENCSLEDALNVICHAEEIAWIQLRRNEKKLLNDINIDKDCRIR
FHINGDKQKRKKRIQTREEKIFVLANDCLTGDPSVHDLSLTQDMNSICSNGCRIARCMKE
YFIFKRNYKGAINSTLLAKSLYQKLWDDSPYLLKQLPGIGMVTAKALHSMGIKSFDTLAE
ADPRRIEILTGRKFPFGNHIKDSLLSLPPKVSMSIEENECHRRGTSKFVVTLTRLSQPLQ
SSKRHYADMIVGTEEDNLVHFHEKIRVDEFSSPYSAAILLSIPQQKKLTLKANLIFEEYI
GLDFHQKLVLMKESNPETNKNRCKQPSLFPPPGDVCVIEDESETTSYGPAGMPSNLTKSK
TINNSMPSFKLIDEDLELGDEGEPGFEIQNDSCKIISEQTIFEHIREKAKSFPLLTTSSN
VCSPSSEAMLLTRKRRRDKAIELDSAPNATEETEGSKISLAFLNVTSEQGERERHGHDSY
KLRTPKHHTSPGRFVVDLVDDSGGLPSKSETSGLNGPTKDTIFDHIRKKAQYFPALSRTM
QFDSVAGTNPYSFENQPDVCIAASQVLKEVNTDRSTGETIIISDSETRRGIDAHSTEPGS
RVKDDTFSRSPHGERGGSSAPPKVSCINTDPSCIEMLPFDISMIKHNTRLAGSRNSTAYG
RKKQSSPNGSKRHCCSLEMAGKNREVDSFLGFTSVFSFL
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtatactctcaagtccgtgtcagatctgccaccgccctttcgttcgattttt
agcttcaggtattttaattcattgcaaagtgaatgtttccctgtctgctaccattcagat
gtaaacatggtgatctcagcaccaaccggtagtggtaaaacagtgctctttgaactgtgc
gtactgaggcttctgtcaaggtttgtctctgaagggaggtttgtgcatgtcaaaggaatg
ctaaaaacaatctacatagccccatctaaggctttagttcaagaaaaactccgtgattgg
actcaaaagtttggatcactggggataaattgcctggagctgactggtgacaatgaattc
tacaacacaaggactatacaagaagcagacattattctaactactcctgagaaatttgat
tctgtcactcggtatcgcataaaggatggtggcttgagctttttcagtgacattggcctg
cttcttattgatgaagttcacctactgaatgatcctcgtggagctgctttagaggcaatt
gttagtagaataaagatgcttgctcacaaacctgaaatgaaatcaagtcctctatcttgt
gttcgttttttagcagtttcagcaacaattccaaatatcgaggatcttgctgagtggctt
aatgttccagtccaaggtatcaaaaggttcggagaagaaatgaggcctgtaaagttgaca
accaaagtttttggctatgctcccgcaaaaaatgattttctatttgaaaagcgccttcaa
aactatatttttgatattctgatgcactattcaagagggaaatctgctctggtattttgc
tcgacaaggaaaggggcacaggaagcagcattgaaactatctcagacagcaatgaccttt
ggttattcgaatccttttattaaagacaaagaacagcaggaaaggctaagggaagcttca
ctttcatgcagcgacaaacaactgcagtcttatatcctatatggtgttggttatcacaat
ggtgggctttgcctgaaagatcggagccttattgagggtctgtttcttaagggtgatatt
aaaattctgtgcaccacaaacacccttgctcatggaatcaacttaccagcacatacagta
gtcataaaatcaacacaacacttcaacaaggaaaaaggtctttatatggaatatgatcgt
tccatgatactacagatgtgtgggagggcaggccggccaccatttgatgatacagggatg
gttataatcatgacaagaagagaaacagttcatttgtatgaaaatatcttgagtggatgt
gaaatggtggaatcacaattgctttcatgcgtgacggagcacttgactgcagagatagta
cagttgactgtttctgatattgcacgggcaattgaatggatgaagtgctcgtacttgtac
gttaggataaaaaagaaccctgagcattatgctgttaagcaaggaatttctagagaccgc
atagaaaagcaaatgcaagagattactgttcagaaagttaacgagttatcacaccaccaa
atgatctggactgacaaggatggttttctactgaagccactagagcccggacggttgatg
accaggtactatttgaaattcaacacaatgaagcatgtcatgcagaccccagaaaactgc
agcttggaagatgcacttaatgttatatgccatgccgaggaaattgcatggatacaactc
agacgcaatgagaaaaagcttctgaatgatatcaacattgataaagattgtcgaattcgg
tttcacatcaatggggataagcagaaacggaaaaagcgtattcaaactagagaggagaag
atatttgttttggcaaatgactgcttgactggggatccttctgttcatgatttatcccta
acccaggacatgaattctatatgttcgaatgggtgtagaattgcaaggtgcatgaaagag
tattttattttcaaaaggaattacaaaggagccatcaactcaacccttctagcaaaatca
ttatatcagaaactctgggatgatagtccatacttgctgaagcaattacctggcattgga
atggtgactgctaaggctctacattcaatgggaattaaatcatttgacacgctagctgaa
gctgatccaaggagaatagagattctcactggccgtaaattcccctttgggaaccacatc
aaggactctctcctatcattacctccgaaagtcagtatgagtattgaggaaaatgagtgc
cataggcgaggcacgtctaagtttgttgtgacattgactaggctatcacaaccactccag
tcatctaaacgacattatgctgatatgattgtcggtacagaagaagataacctggttcac
ttccatgagaaaataagagtggatgagttctcaagcccctatagtgcagcaattctcctg
tcaatcccgcaacagaaaaagctgactttgaaggctaatcttatttttgaagaatacatt
ggtcttgatttccaccaaaaacttgtgttgatgaaggaaagcaatccagaaacaaacaaa
aacagatgcaagcagccttccctgtttcctccacctggggatgtttgtgtcatagaagac
gaaagtgaaacgacatcttatggtccagctggaatgccttccaatttgacaaaatccaaa
acaataaacaattcaatgccaagtttcaaactcattgatgaggatttggaattgggagat
gaaggcgagcctggttttgaaatccaaaatgacagttgtaaaatcatatctgaacaaacg
atatttgagcacatacgtgaaaaggccaagagcttccctctcttgactacttcaagcaat
gtttgttctccatcatcagaggccatgctcctcacaagaaaacgtcgtcgtgacaaggcc
attgaacttgatagcgcaccgaatgctacggaagagacagaaggaagcaaaatctcacta
gcttttctcaatgtgacttcagaacaaggagagagagaacggcatggacatgatagctac
aagcttaggactccgaagcatcacactagccccggaaggtttgttgtagaccttgtggat
gattcaggtgggcttccttctaaatctgaaacaagtgggctcaatggtccaacaaaagat
acgatatttgatcacataaggaaaaaagcccagtattttccagcgttgtcaagaaccatg
cagtttgactctgtagctgggacaaatccatactcgtttgagaatcaacctgacgtttgc
attgctgcttcacaagttttgaaagaggtgaacactgatagatctaccggagaaaccata
atcatttcagattcggaaaccaggagaggcatagatgcacacagtacagagccaggatca
agggttaaagatgatacattttctcggagtccccatggagagcgcggaggttcgagcgct
cctccgaaagtctcatgcatcaacaccgatccttcttgtatcgaaatgttaccttttgac
atttctatgataaaacataatacgcggctagcaggctcgagaaactccacggcgtatggc
aggaagaagcagtcttctccaaacggatccaaaagacactgctgctcattggaaatggct
ggtaagaatagggaagtcgactcatttcttgggtttacgagtgtcttttcatttctctga
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