Populus alba (white poplar): 118037098
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Entry
118037098 CDS
T07314
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Pathway
palz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118037098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118037098
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118037098
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
118037098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Nop14
SDA1_dom
CDC45
BUD22
Motif
Other DBs
NCBI-GeneID:
118037098
NCBI-ProteinID:
XP_034898879
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Position
17:complement(21008547..21011367)
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AA seq
415 aa
AA seq
DB search
MQIKINTLQREMAKFSLEDGEGSSFPRPKRQRPSSPSSPPPDFTMGEIVREDEESEEDEE
EDDVDTSDGSEEEEEEEDEEEEEEEEEQVEEIVRPQPQPPQPQPPPPPPPQQQQQPPSRP
QENNQITVGLQLPQHRLFEASVFLGHTLVGPSRNGAIYATLSDPEVLDCPICCEPLTIPV
FQCDNGHTACSSCCKKLQLKCPSCAMPIGYNRCRAIEKVLESLKVQCSNRSYGCKESICY
SKKYEHDKSCPHAPCTCPLPACNYQGSSKHLYLHCGSKHLCDLTSFQFNTSFPLFFMVDH
KFRVLQEEKEGVLFILTNRSECLGNVITVSCMGPSSSKQGYFYELTAKAEGSNVRFQSST
RNIQTRVDYPPSLGFLLVPNDFLGTHGGITLDVCIWRLGSYPSVSSSLGSSIQCK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcaaataaaaatcaatactttgcagagagagatggcaaaattctcacttgaagatgga
gaagggtcaagctttccaaggccaaaaagacaaagaccctcttctccctcttctcctcct
cctgattttaccatgggagaaattgttcgcgaggatgaagaatctgaagaagatgaggaa
gaggacgatgtggacacaagtgatggaagtgaagaagaagaagaagaagaagatgaggag
gaggaggaggaggaggaggagcaggtggaagaaatagttagaccacaaccacaaccacca
caaccacaaccaccaccaccaccaccaccacaacaacaacaacaaccaccatcgcggccg
caagaaaataatcagataactgtgggactacagctaccacagcacagattgtttgaggct
tcagtctttctaggacatacccttgtggggccaagcagaaatggggctatttatgcaact
ttatcagacccagaagttcttgattgtccaatctgctgtgaacccttgaccattcctgtt
tttcagtgtgataatggacatacagcttgctcttcatgctgcaaaaaacttcaactcaag
tgtccttcttgcgctatgcctattggctataaccgctgtcgtgccattgagaaagttctt
gaatcactgaaagtgcaatgctccaataggagttatgggtgcaaagaaagcatttgttac
agtaagaaatacgaacatgataagagttgcccccatgctccatgtacatgccccctgcca
gcttgcaactaccagggctcatctaagcatttgtacctacattgtgggagtaaacattta
tgtgacttgacatctttccaatttaataccagcttccctcttttctttatggttgatcac
aaattccgtgttcttcaagaagagaaagaaggtgttttattcattctgactaatagatcg
gagtgtcttggaaatgtgatcactgttagttgtatggggccttcttcatcaaagcaagga
tacttttatgaactcacagcaaaagcggagggaagcaatgtcagattccaatcttccact
agaaatatccaaaccagagttgattacccaccatcactggggttccttctagtcccaaat
gatttccttggtacccatggggggatcaccttggatgtctgcatatggcgtcttggctca
tatccttctgtaagctcctcactgggcagctctatccaatgtaagtga
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