Populus alba (white poplar): 118037277
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Entry
118037277 CDS
T07314
Name
(RefSeq) rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
118037277
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
118037277
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
Motif
Other DBs
NCBI-GeneID:
118037277
NCBI-ProteinID:
XP_034899088
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Position
14:796961..803054
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AA seq
678 aa
AA seq
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MEKVDASLLRWLTLLIWFFFIVKLTAASRKIFQSENGKSLGVRLHKHHHRVCMMVMDNGL
VQVTLSSPGGDITGIQYNGIQNVLETRNRESNRGYWDVVWNLPGNHIAYDRLKGTDFNVI
MEDEDQVELSFKKSWNFTNGNSSAPLNVDKRYIMRRGSSGVYLYAILERLEGWPDMDMDQ
IRIVFKLQNDMFHFMAISDDRQRIMPMPRDRINGEPLAYPEAVLLTNPTNPQLGGEVDDK
YQYSCENKDNRVHGWISENPPVGFWMITPSDEFRAGGPLKQDLTSHVGPTALSMFTSTHY
SGKDLNTKYRNGKPWKKVLGPVFVYLNSISSLEDPTTLWEDAKDQMSIEVNSWPYNFPQS
EDFPSSDRRGTVSGQLLVGDKYISDKPMWASYAYVGLAAPGGVGSWQRDAMGYQFWVQAN
EEGHFLIENIRAGHYNLYAWVPGIVGDCRYDVIIHIQPGSDAKLGALVYEPPRNGPTLWE
IGIPDRTAAEFFVPDTYPTLMNKLFINQSTHKFRQYGLWERYSDLYPKHDLIYTIGISNY
HQDWFFAQVPRNMGNHTYQATTWQIKFEIENATPRTGNYTLQVALASASASELQVRFNDR
RARRPHFRTRLIGRDNAIARHGIHGLYWFYSINVASRLLRQGNNTVYLTQSRSKSPVGGI
MYDYIRLEGPPETGPSVE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagtcgatgcttctcttttgaggtggttaacattgttgatttggttcttcttc
attgtcaagctcaccgctgcttcaaggaaaattttccagagtgaaaacggtaaatctctt
ggggtgcggctgcataagcatcatcatcgggtatgtatgatggtgatggataatggcctt
gtacaagtcactttgtctagtccgggcggtgatatcaccggaatacagtacaacggaatc
caaaatgtacttgaaaccaggaatagggaaagcaaccgagggtattgggacgttgtctgg
aacttgcctggaaatcatatagcttacgacagattgaaaggaacagattttaacgttata
atggaagatgaagaccaagtagaactctcattcaagaagtcttggaatttcacaaatggg
aactcctcagccccgctgaacgtagacaaaaggtatataatgcgacggggcagctcaggg
gtctacttgtatgccatattagaacgcctggagggatggcctgacatggacatggatcaa
attagaatcgttttcaagctccaaaatgacatgtttcacttcatggcaatatctgacgac
aggcaaaggatcatgccaatgcctcgagacagaatcaatggtgagcctcttgcatatcca
gaagctgttctcctgaccaatccaactaatccacagcttggaggagaggtggacgacaag
tatcaatattcatgtgagaacaaagacaacagggtacatggttggatatcagaaaatcca
ccggtgggattttggatgatcacaccaagtgatgagttccgggccggtggtcccctgaaa
caagacctcacatctcatgtcggccccaccgccctctctatgtttaccagcactcattac
agtgggaaggacttgaacacgaaatatcgaaacggaaagccatggaaaaaggttctagga
cctgtatttgtctatctcaactccatctcctcccttgaagatcccacgacactatgggaa
gatgctaaggatcagatgtctatagaagtcaacagctggccttacaatttccctcagtca
gaagatttccctagctccgatcgacgaggaactgtttctggtcaattactagttggtgac
aagtacatcagtgacaaaccaatgtgggcgagctatgcctatgtgggcttggctgcacca
ggaggggtgggttcgtggcaaagagacgccatggggtatcaattctgggttcaagccaat
gaggagggtcatttcttaattgaaaacattagagctgggcactacaatctgtatgcctgg
gttcccggcattgttggggattgcagatatgatgttattatccacatccaaccaggaagt
gatgccaaattgggtgctcttgtgtacgagcctccaagaaatggtccgaccctttgggaa
ataggaatccctgaccgcaccgctgccgaattctttgtgcccgacacatacccgacgctc
atgaacaaattgttcatcaaccaatcaactcacaagtttaggcagtatggactgtgggaa
aggtactcagatttgtatcctaagcatgaccttatttacactattggcatcagtaattat
catcaagattggttctttgctcaggttcccaggaacatgggaaatcacacatatcaagcc
acgacatggcagatcaaattcgagatagaaaatgcgaccccgaggaccggaaactataca
ctccaagtggccttggcatcagcctccgcttctgaactacaggttcggttcaatgacaga
agagccagaagacctcatttcagaacaaggctaataggaagggacaatgcaattgcccgc
catggaattcatggtctgtactggttttatagcattaacgtggcaagccgtctgcttcgc
cagggaaacaacactgtatatctcactcagtcgagaagcaaatcccctgttggaggaatt
atgtatgattacattcgtttagaagggcctccagaaacgggtccgagtgtagaatga
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