Populus alba (white poplar): 118037436
Help
Entry
118037436 CDS
T07314
Name
(RefSeq) lethal(2) giant larvae protein homolog SRO77-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118037436
Membrane trafficking [BR:
palz04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118037436
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
118037436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40
Synaptobrevin
Beta-prop_IFT140_1st
WDR55
CPSF_A
ABC_tran_Xtn
Motif
Other DBs
NCBI-GeneID:
118037436
NCBI-ProteinID:
XP_034899297
LinkDB
All DBs
Position
16:complement(13436250..13444817)
Genome browser
AA seq
1115 aa
AA seq
DB search
MLSAKRLIQKAVLLHHHQNNEERSSLTAADFDLQVVIHYGIPSTASLLAFDPIQRLLAIA
TLDGRIKVIGGDGIEALFTSPKQLPYKNIEFLQNQGFLISISIENDIQVWNLESRCLACS
LQWELNITAFSVISRSCFMYIGDEHGSMSVLKYDSEDAKLLWLPYHITANSLKEAAGFPS
PDHQPIVGVLPQPHSSGNRVLIAYQNGLIVLWDVSEGRILFVGGGKDLQLKDDSKNVDPN
IPKDTSHHHLEEKEITALSWASSNGSILAVGYLDGDILFWKTSTASFTRGQKNESTNSNI
VKLQLSSAEKRLPIIVLHWSTSDRPSNDGDGRLFIYGGDEIGSEEVLTVLALEWSSRMET
VRCVGRMDITLAGSFADMILLPSSGPTEGNPKAAVSVLANPGQLHLFDDASLSALPSRQK
HKASVLNMGFPMVVPTVDPPITVAKFITLPSGGNSSKMFSEIATATKHGSTPFQGGSANW
PLTGGVPSHLSFTEHTGVERVYIAGYLDGSVRLWDATYPALSLICIVEGEVESIEVAGFS
DPVTNLDFCSLTLSLAVGNKCGLVRIYNLNGSSDETTFHFLIDTKHEVHTLPQGKGPPLR
AVFSLLNSPILALQFANYGAKLAVGLECGRVAVLDTSSLAVLFSTESVSSSCSPVISVNW
VECINTCSLVKSPKHSDSNMPINPTEQVMFFLTKDATIYMIDGGTGRMISSRPWHPKKKS
VAISMYVIDGSPSVPGLTDGKQLEESDQNFTAKNESEHTTTSTGISSHNNEHHSSVNTLT
RERLLDSFILLCCEYSLCLYSTKNVIQGNNKTICKVKHAKPCCWASTFRKEGNICGVVLL
FQSGVIEIRSFSGLELVKETSLMSVLRWNFKANMEKMMSCDNGQITVAHGCELAFISLFS
GENCFRIPESLPCLHDKVLAAAADAAFNFSSNQKKKQGTKPGILGGIVKGFKGGKVDHSV
DITPSPKSDFSHLEGAFSKQPFSDSYRTAVDSEEVVELNIDDIEIDEPSLPTATTSAQDV
KNMKREKRSEREQLLGATDDMKPKLRTPEEIMAKYRKAGDASSAAAQARNKLVERQEKLE
RISRRTAELQSGAEDFSSMANELVKLMEKRKWWQI
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgccaagcgactcattcaaaaagccgtcctcctccaccatcaccagaataac
gaggaacgcagcagcttgacggcagcggactttgatttgcaagttgttatacactacggg
attccgtccacggcttcccttcttgcttttgatcccattcagcgccttttggctattgcc
acactggatgggagaattaaagtgattggtggtgatggtattgaagcactttttacgtca
ccgaagcaactgccttacaagaacatagagttcttacagaatcaaggattcttgatcagc
atttctattgagaatgatattcaggtctggaatctggagagcagatgcttagcatgttca
ttacaatgggaattgaatataactgcgttttctgtaatcagtcgctcttgtttcatgtat
attggagatgaacacggttcaatgtccgtgctgaagtatgattctgaagatgctaaactt
ttgtggttgccttatcatataactgcaaactctttaaaggaagcagctggatttccatct
cccgatcaccaacctattgttggagttcttcctcagcctcattcttcaggaaatagggtt
ctgattgcatatcaaaatggattgatagttctctgggatgtttctgaaggtcggatcctt
tttgttggaggtggcaaggatctccaactgaaggatgattctaaaaatgtagaccctaat
attcccaaagatacatctcatcatcatttagaggagaaagagatcacagctctaagttgg
gcatcttcaaatgggtccatccttgcagtgggatatttagacggggatatcttgttttgg
aaaacatcaactgcttctttcactagaggtcaaaaaaatgaatcgacaaacagcaatatt
gttaagttacaattatcatcagctgaaaagaggctccctattattgttttacattggtcc
acaagtgatagacctagtaatgatggtgatggccgattgtttatctatggtggtgatgaa
ataggatctgaagaagttctaacagtgttagctttagagtggtcatctaggatggaaaca
gtgagatgtgttggtcgcatggatatcacacttgccggctcttttgcggacatgattttg
ttaccaagttctggaccaacagagggtaatcccaaagctgctgtttctgtattggcaaac
cctggacaacttcatctttttgatgatgctagcttgtctgccttaccatctcggcaaaag
cataaagcaagtgtcttgaatatgggatttcccatggtagtacctacagtagatccaccc
ataactgtggcgaagttcattacgttgccctcaggaggaaactcatcaaagatgttttcc
gagatagccacagctacaaaacacggatccacaccattccagggtggttctgcaaattgg
cccttgactgggggtgtgcccagtcatctgtcattcacagaacatactggtgttgagaga
gtgtacatagcaggttatctagatggatctgtaaggttatgggatgccacatatcctgcc
ttatcacttatttgcattgtagaaggcgaggttgaaagcatagaagtggctggatttagt
gatccagtgacgaatttagacttctgttccctaacactaagtctggctgttggcaacaaa
tgtggactggttcgcatttataacctgaatggcagctcagatgagactaccttccacttt
ctcatagatactaaacatgaagttcacacgttgcctcaagggaaaggtcctccacttaga
gctgttttttctcttctcaattctcctattcttgcactacagtttgctaattatggagcc
aagcttgctgtggggcttgaatgtggtcgtgtggctgtacttgatacgagttcattagca
gttttgttctctacagaatctgtatccagctcttgctcgccagtcatttcagtgaattgg
gttgaatgtataaatacttgtagccttgtgaaaagcccaaagcattcagattctaatatg
ccaatcaaccctacagagcaagtcatgtttttccttaccaaggatgcaactatttatatg
attgatggtggaaccggtagaatgataagctcccgtccatggcatccaaaaaagaaatca
gttgcaatttctatgtatgttatagatggcagtccttctgtacctggcttaacagatgga
aagcagctggaggagtctgaccaaaatttcacagccaagaatgaatctgaacatacaaca
acttcaacagggattagttcacataataatgagcatcactcttcagttaacacactaacc
agagaaagattgctggattcatttattttgctttgttgtgagtattcattgtgcttatac
tctacaaagaatgttattcagggaaacaacaaaaccatttgtaaagtgaaacatgcaaaa
ccttgctgttgggcttcaacttttaggaaagagggaaacatttgtggagtggttttgctg
ttccagagcggagtaatagaaatcagatcattttcgggtttagagttggtgaaagaaacc
tccttaatgtcagttctaaggtggaatttcaaggcaaacatggagaagatgatgagttgt
gataatggacagattacagtggctcatgggtgtgaattggccttcatctcactattttcc
ggtgaaaattgtttcaggattccagagtctcttccatgtcttcatgataaggtacttgcc
gctgccgccgacgctgcctttaatttctcctcgaatcagaagaagaagcagggtactaaa
cctgggattctcggtggcattgtcaaaggctttaaagggggaaaggtagaccacagtgtg
gatattactccgagtcccaaatctgattttagtcatcttgaaggtgctttttcgaagcag
ccattctcagattcatatcgaactgcagtagatagtgaggaagttgtggagcttaatata
gatgatattgagatagatgaaccttctctacccacagcaactacttcagcacaagacgtg
aagaatatgaagagagagaagcggtcagaaagggagcaattattaggtgcgactgatgat
atgaagcccaaacttaggacacctgaagaaattatggctaaatacagaaaagcaggggat
gcttcttcggctgctgcacaagcaagaaacaagcttgtagaaaggcaggaaaaacttgaa
agaatcagtaggcgcactgcagagctccaaagtggagccgaagacttttcatcaatggca
aacgagcttgtcaagttaatggaaaaacgaaaatggtggcaaatatga
DBGET
integrated database retrieval system
