Populus alba (white poplar): 118037622
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Entry
118037622 CDS
T07314
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
palz
Populus alba (white poplar)
Pathway
palz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118037622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118037622
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118037622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
118037622
NCBI-ProteinID:
XP_034899547
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Position
6:complement(24475603..24481558)
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AA seq
745 aa
AA seq
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MPRKGNYGFDYDDYDDYDYDYDVEDQVEAPEPTKKTSSDKVRVWSCPICTYDNDESMTAC
DICGVIRSSVPGKFKDDKGTVGIICKDSGVSIMAKSLFASLPHRTPQKAVVGHRRNDDFV
TEEGNNFQKPGNCQGKFDEFHKAFIPHNHSHFDIAPFKFDFPSPDDMVSNGLRSSKIGSK
ANLINSRSQNAYAGISETVKSSDKSSASVPKGKQGRPGVDEGNHNKNGVVDTQSNDEISD
STSSLMPKAKDKSVGYSSSSINGGKSLGLTSNLNDMSLSDKSGNSNKDSAKRPKSSARYQ
PDKWMLPDKSENALTQLNLAIVGHVDSGKSTLSGRLLHLSGRITQKEMHKYEKEAKLQGK
GSFAYAWALDESPEERERGITMTVAVAYFDSKKYHVVVLDSPGHKDFVPNMISGATQADA
AILVIDASIGGFEAGMDSKGQTREHARLIRSFGVDQIIVAVNKMDSVEYSKDRFDLIGTQ
LGTFLRSCGFKDSLVSWIPLSAVENQNLVAAPSDVRLSSWYHGSYLLDAIDSLQPLKRDF
SKPLLMPICDVVKSSSQGQVSACGKLEAGALRSGLKVLVMPSGDVGTVRTLERDSQICAV
ARAGDNVTVSLQGIDGSNVMAGGVLCHPDFPVAVAKHFELKVLVLDFLTIPIVIGSQLEF
HIHHAKEAARVVKIISVLDPKTGKVSKKAPRCLTSKQSAIIEVALDGPVCAEEFTNSRAL
GRAFLRTLGKTVAVGIVTRIIEDQE
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagggaattacggatttgattatgatgattacgacgattatgactatgac
tatgatgtagaagatcaagttgaagcacctgagcctacgaaaaaaacgagtagtgataag
gttcgggtatggagttgcccgatttgcacttatgataatgatgagagtatgactgcatgt
gatatttgcggtgttattcgaagttctgtccctggaaaattcaaggatgacaagggaaca
gttggcattatatgcaaagattctggagtatccattatggccaagtctctttttgcatca
ttgccacatcggacaccacaaaaggctgtagtaggtcaccggcggaatgatgattttgtg
acagaggagggcaataacttccaaaagcctgggaattgccaaggaaaatttgatgaattc
cataaggcttttattccccataatcactcccattttgatatagctcctttcaagtttgat
ttcccatctccagatgacatggtttctaatgggttacgatcctccaaaattggatctaaa
gccaaccttattaactccagatctcaaaatgcatatgctggcatttctgagactgttaaa
agttcagataaatcatctgcctcagttccaaaaggcaaacaaggcaggcctggtgttgat
gagggcaatcataacaagaatggcgttgttgacacccaatcaaatgatgaaatttcagat
agcacatcttcattgatgccaaaggccaaagataaaagtgttggttatagcagttcttca
ataaatgggggcaaatctcttggtcttacaagtaatttgaatgacatgtctttgtctgat
aaatctggaaactcaaataaggatagtgccaagaggcctaagtcatctgcacgatatcaa
cctgataaatggatgctcccagacaaatcagaaaatgcattgacacaactgaatcttgct
attgttggccatgttgattctggcaaatcaacactctcaggtagactgctacatctttcg
ggacggataacccaaaaagaaatgcacaaatatgaaaaggaggccaagttacagggcaag
gggtcattcgcttatgcttgggcattggatgagagtcctgaagaaagggaaaggggaata
actatgacagtcgctgttgcttattttgattccaaaaaatatcatgttgttgtgcttgat
tccccaggccataaagactttgtcccaaacatgatatctggcgcaacacaagctgatgct
gccatccttgttatagatgcctccattgggggttttgaagctggaatggacagcaaaggg
caaactagggaacatgcacgtcttattagaagttttggggttgaccaaatcattgtcgca
gttaacaaaatggactcagtagagtactccaaagaccgatttgatttgattggaacacaa
cttggaacatttcttcgttcttgtggattcaaggattccttggtgtcatggattccgttg
agtgcagtggaaaatcaaaatttagttgcagctccttctgatgttcgtttatcatcctgg
taccatggatcttatctgttggatgcaattgattctcttcagccactgaagagagatttc
tcaaaacctcttctcatgcccatatgtgatgtagttaaatcatcttcacaagggcaggtg
tcagcctgcggtaaactggaggctggtgctcttcggagtggattgaaggttttagttatg
ccatcaggagatgtggggacagtacgcacactagaacgggactctcagatttgtgcagtc
gcaagagcaggagataatgtgactgtcagtctccaaggcattgatggaagtaatgtgatg
gctgggggtgttctatgtcatcctgactttcctgttgcagttgcaaaacattttgagctg
aaagtgctcgtcttagattttttgacaatcccaattgtcattggctctcaattggaattc
cacatacaccatgcaaaggaggctgcaagagttgttaaaataatatcagtacttgatcca
aagaccggcaaggtgtcaaagaaggcacctcgctgtcttacctcaaagcagagtgccata
atcgaggtggctttggatggaccagtttgtgcggaagagttcacgaattccagggctctt
ggaagggcctttttgagaacattagggaaaaccgttgccgtcggaattgtaacaaggata
attgaggatcaggaatag
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