Populus alba (white poplar): 118037997
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Entry
118037997 CDS
T07314
Name
(RefSeq) oligouridylate-binding protein 1B
KO
K13201
nucleolysin TIA-1/TIAR
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118037997
03041 Spliceosome [BR:
palz03041
]
118037997
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118037997
Spliceosome [BR:
palz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118037997
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
118037997
NCBI-ProteinID:
XP_034900098
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All DBs
Position
3:10810912..10816284
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AA seq
421 aa
AA seq
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MQQQRLKQQQQALMQQALLQQQSIYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNI
HTQVTEPLLQEVFASTGPVEGCKLIRKEKSSYGFIHYFDRRAAALAILSLNGRHLFGQPI
KVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLYACFSVYSSCSDARVMWDQKTGRSRG
FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWASKGAGSIEDKQSSDSKSVVELTNGTS
EDGMEAPNNEAPENNPQYTTVYVGNLSPEVTQPVLHRHFHVLGAGVIEDVRVQRDKGFGF
VRFSTHAEAAVAIQMGNAQSLLCGKQIKCSWGSKPTPPGTSSNPLPPPAVAPLPGISATD
IFAYERQLTLSKMGGVHPFMPPHGQLPLKQAAMGMGAGASQAIYDGGFQNVAAAQQLMYY
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcagaggcttaaacagcaacaacaggcactgatgcaacaagctcttctccaa
cagcagtcaatttaccatcctggtctcctcgctcctcctcagattgagccaattccaagt
ggaaatctgcctcctggttttgatccaagtacttgccgcagtgtgtacgtgggaaacatc
cacactcaggtaactgaacccctccttcaagaggtttttgcaagtactggtcctgttgaa
ggatgcaagcttatcagaaaagaaaagtcatcctatggatttattcactactttgatcgc
cgagcagctgcgcttgctatattatcacttaatggaaggcatctatttggtcagcctatc
aaagttaactgggcatatgctagtggtcagagggaagacacatcaggtcacttcaacatt
tttgttggagatcttagtcctgaggttactgatgcaacattgtatgcctgcttttctgtt
tattccagttgttcagatgcaagggttatgtgggatcagaagactgggcgttcaagaggg
tttgggtttgtttccttccgaaatcaacaggatgcccagagtgcgataaatgacctaaca
ggaaagtggctcggcagcagacagattcgttgcaactgggcatctaaaggtgctggttcc
attgaagacaaacaaagttctgattcaaaaagtgtggtggaactaacaaatggcacatca
gaggatggcatggaggcaccaaataatgaggctcctgaaaacaatcctcagtataccact
gtttatgtgggcaatctttctccagaggtaactcagcctgttctccaccgccatttccat
gttcttggtgccggagttattgaggatgtccgagtccagagagacaaaggttttgggttt
gtgaggttcagtactcatgccgaggcagctgtagctattcagatgggaaatgcccaatca
cttctttgtggtaaacaaataaagtgctcatggggtagtaagcccactccgccaggaaca
agctcaaatccactacccccacctgctgttgcccctttgcctgggatctcagctacagat
atcttcgcatatgagaggcagctaacattgagcaagatgggtggtgtccatccctttatg
cctcctcatgggcagcttcctctaaaacaagcagctatgggaatgggtgccggtgcaagc
caggcaatatatgatggtggtttccagaatgttgctgctgcccagcaactcatgtactat
cagtaa
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