KEGG   Populus alba (white poplar): 118038603
Entry
118038603         CDS       T07314                                 
Name
(RefSeq) uncharacterized protein
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
palz  Populus alba (white poplar)
Pathway
palz03013  Nucleocytoplasmic transport
palz03015  mRNA surveillance pathway
palz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118038603
  09122 Translation
   03013 Nucleocytoplasmic transport
    118038603
   03015 mRNA surveillance pathway
    118038603
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:palz03019]
    118038603
   03041 Spliceosome [BR:palz03041]
    118038603
Messenger RNA biogenesis [BR:palz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     118038603
Spliceosome [BR:palz03041]
 Complex C
  Other components
   EJC/TREX
    118038603
SSDB
Motif
Pfam: RSB_motif SAP
Other DBs
NCBI-GeneID: 118038603
NCBI-ProteinID: XP_034900898
LinkDB
Position
5:6037168..6042153
AA seq 774 aa
MSSQYPVLGNKLDLVQLKVTELKEELKRRKLKTSGLKDDLVKRLEEAIRIEREDEEIRNE
LVNAVVAVGVDNGVDLENLHVVGVKNAEAVSAVTETVEVVVDDAANRDEKVGDVMVQAGI
DESVKAMGSRELQEEVKMGGVNSSRVEEEELTTHATTMETSISVTESVVSELALSVQDVQ
NSGTQEANENSSIQLENEDSKPQLENESSKPSDENVMLESSAPDNQVSEVNPNLGFQVNS
DSISTDSVSINEKIELKDNIIADDVKLELDDVKLEMVEPSSSNVVPVGGESHPMDVEEPQ
EKSPSVEKKDDSNGTNADMSKKNDSVDVGYSEKLNLDRSSGDDSMEEDVLESKQIDSKYN
TDEVGDKCKIKNELPSVKEENLVNVTGKDLSTDQKEIHVENRTCPVAPMEKRKLNDQEAV
GNTEPLKRQRRWNSESIKVPEQQSSNLTPTTTPNDGFQPTPFRRNFSRSESSVSEEAPKE
RIVPPSQKPPTNSLRIDRFLRPFTLKAVQELLGKTGSVTSFWMDHIKTHCYVMYSSVEEA
VETRNTVYNLQWPPNGGRLLVAEFVDPQEVKIRVDAPPQSPAAPVTPSTAAPAPSPPMLQ
PQPSPRQQVSRQQLPPPPSLPLPPPLSNPPHVRERVDLPPPPPLPEKHDPPIVTLDDLFR
KTKTAPRIYYLPLSEEQVAAKLAGHGKNTKQSAGVACRRELFQPSRGMWFVAGFGFSEDC
MMLKKLKVLLALETFQLRALYMSGSPDMWTYLVFLLNKNFNFPNLKQLALNSLH
NT seq 2325 nt   +upstreamnt  +downstreamnt
atgtcttcacaatacccagttcttggaaataaactggacttagtccagttgaaggttact
gagttaaaagaagagcttaaaaggcggaaattgaaaaccagtggtttgaaggatgatttg
gttaaacggttggaagaagcaattcgtattgagagggaagatgaagaaattcgcaatgag
ctggtaaatgcagtggttgcagtgggtgtggataatggtgttgatttggagaacctgcat
gtagttggggtgaaaaatgcagaggcagtatcggctgttactgagacagttgaagttgtt
gtggatgatgctgctaacagagatgagaaggtgggtgatgttatggttcaggctggcatt
gatgagagtgtgaaagccatgggttcaagagaacttcaagaggaggtcaaaatgggtggc
gttaattcttctagggtagaagaagaggagctcactactcatgcaactaccatggagacc
agcatctctgttactgagagtgtggtatctgaattagcattaagtgtgcaagatgtgcaa
aattctggaacacaggaggcaaatgagaactcaagtatccagctggagaatgaagattca
aagccccagctggagaatgagagttcaaagccttcagacgagaatgtcatgcttgagtct
tctgctccggacaaccaggtatctgaggtcaaccctaatttagggtttcaagtaaactct
gattctatttctactgattctgtatcaattaatgaaaagattgaactaaaggataatata
attgctgatgatgtcaaattagaactagatgatgttaagctagagatggtggaaccatca
tccagtaatgtcgtcccagttggtggtgaatcacatccaatggatgttgaagagccacaa
gaaaagagtccctctgttgaaaagaaagatgacagcaatggtacaaatgcagatatgagc
aagaaaaatgacagtgttgatgtggggtactcggagaagttgaatttggacaggagttct
ggtgatgactccatggaggaagatgttctagagagtaagcaaattgattcaaagtataat
actgatgaagtgggagataagtgtaaaataaaaaatgaactgcccagtgtgaaggaggaa
aatctagttaatgttactgggaaggatttatctactgatcaaaaggagatccatgtcgag
aacaggacttgtccagttgcacccatggaaaaaagaaagcttaatgatcaagaagctgtt
ggaaacacagaacctttaaagcggcaacgaagatggaattctgagagcatcaaggttcct
gaacagcaaagctctaatcttacacccaccaccacaccaaatgatgggtttcaaccgact
cctttccgacgcaacttttctcgatctgagtcctctgttagtgaggaggcacccaaggag
cgcatcgttccaccatcacaaaaaccgcctacaaattctctcagaatcgatcgttttctg
cgtccttttactctgaaagctgtccaagaactcctgggcaaaaccgggagtgtcaccagt
ttttggatggatcatatcaaaacccattgctatgttatgtattcgtctgtggaagaagct
gtggagacacgaaatactgtttataacctacaatggccaccaaatggtggacgtctttta
gtggctgagtttgttgatcctcaggaagttaaaatccgggtggatgctcctcctcagtct
ccagctgcacctgtcactcctagtacggctgcacctgcaccctccccacccatgttgcag
ccacagccctctccccgtcaacaggtttctaggcagcagcttccacctccaccttccctt
ccacttccaccgccgctgtctaacccaccccatgtcagggaacgggtcgatcttcctcca
ccccctccacttcctgagaaacatgatcctccaattgtcaccctggatgacctctttcgg
aaaaccaaaacagctcctcggatctactatttaccattatcagaagagcaagtcgcagca
aaacttgcaggacatggcaaaaacaccaagcagtctgcaggtgttgcttgtaggagggaa
ttgttccagccaagcagaggaatgtggttcgttgctggatttggtttttctgaagactgc
atgatgttgaagaagcttaaggttttattagcattagaaacttttcaactaagagctctc
tatatgagtggatcgcccgacatgtggacatatcttgttttcctgttgaacaagaatttt
aactttcccaatcttaaacagttggctctaaattccttgcattga

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