Populus alba (white poplar): 118038838
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Entry
118038838 CDS
T07314
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
palz
Populus alba (white poplar)
Pathway
palz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118038838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118038838
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
118038838
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
118038838
NCBI-ProteinID:
XP_034901176
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Position
4:complement(21285671..21289414)
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AA seq
259 aa
AA seq
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MASKGGAAPSTYTPARTPTNKAQRPPFFTDSDVDWTRSDGRGFHQCRSAFFRTGAVNSAA
GSAYAEFGNTKVIVSVFGPRESKKAIMYSDKGRLNCNVSYTTFATTVHGQGSDNKEFSTM
LHKALEGAVMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVAGVSV
SCLGRNLIIDPILEEESFQDGSLMITCMPSHYEVTQLTITGEWSTANLNEAMQLCLDACS
KLAKIMRSCLKDAASPSKD
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaaggtggtgcagcgccaagcacttacactcccgctcgcactcccaccaac
aaagcccaacgtcctccattcttcactgactctgacgtcgactggacacgttccgatggc
cgtggtttccaccagtgccgatctgcctttttccggactggtgctgtcaactctgctgca
ggatctgcttatgctgagtttggaaatacaaaggtcattgtttctgtgtttgggcccaga
gagagtaagaaagcaattatgtatagtgacaagggcaggcttaattgcaatgttagctat
accactttcgccaccactgttcatggacagggatcagacaacaaagagttttccaccatg
cttcataaggcattggaaggggcagtaatgctggaaacttttcccaaaacaactgtagat
gtgtttgcattggtgttagaatctggtggcagtgatcttcctgttgtaatatcttgtgca
agccttgccttggcagatgctgggattatgatgtatgaccttgttgctggagtttctgtg
tcttgtcttggcagaaacctcatcattgatccaattttggaagaggaaagttttcaagac
ggaagcctgatgatcacttgcatgccttctcattatgaggtcacgcagcttaccattaca
ggggaatggtcaactgcaaatctgaatgaggcaatgcagctttgcttggatgcttgctca
aagctggcaaagataatgaggtcctgtttgaaagacgctgcttcaccttcaaaagattag
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